Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0793 |
Symbol | |
ID | 4080437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 799193 |
End bp | 799849 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009153 |
Product | hydrolase |
Protein accession | YP_615846 |
Protein GI | 103486285 |
COG category | [R] General function prediction only |
COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.100096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0734113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACG TCATTTTCCC CGGCCCCGAG GGCCGCATCG AAGGCCGTTT CTCGCCCCCG CCGCGTCCGC GCGCGCCGGT TGCGCTGATC CTCCACCCGC ACCCGCAGGG CGGCGGCACG ATGAACGACC GCATCACGCA GGCGATGTAC AAGAGCTTCG TCGCGCGCGG TTTCGCGGTG CTACGCTTCA ACTTTCGCGG CGTCGGCCGC AGTCAGGGCA CCTTCGACAA TGGTATCGGC GAACTGTCCG ATGCCGCATC GGCGCTCGAC TGGGTGCAGT CGATCCATCC CGAGGCGCAA ACCACCTGGG TGGCGGGGTT CAGCTTCGGC GCCTGGATCG GGATGCAATT GCTGATGCGC CGCCCCGAAA TCCGCGGCTT CCTCTCGGTC GCGCCGCCGG CGAATATGTA CGACTTCAGC TTCCTCGCCC CCTGCCCGTC ATCGGGGATC ATCGTCGCGG GCGGGCAGGA CGAGATCGTG CCGCCGTCCG CGGTGCAGAA GCTGGTCGAC AAGCTGCGCA CGCAAAAGGG CATCACCATC CATCACGACG AAATCCCGCG CGCCAACCAT TTCTTCGAGC ATGAGCTCGA TCAGCTGATG AAGTCGCTCG ACAATTATCT GGACATGCGG CTCGCGCCCG ATTCGCCGAT CCGGTGA
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Protein sequence | MPDVIFPGPE GRIEGRFSPP PRPRAPVALI LHPHPQGGGT MNDRITQAMY KSFVARGFAV LRFNFRGVGR SQGTFDNGIG ELSDAASALD WVQSIHPEAQ TTWVAGFSFG AWIGMQLLMR RPEIRGFLSV APPANMYDFS FLAPCPSSGI IVAGGQDEIV PPSAVQKLVD KLRTQKGITI HHDEIPRANH FFEHELDQLM KSLDNYLDMR LAPDSPIR
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