| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0774 |
|---|
| Symbol | |
|---|
| ID | 4080917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 780895 |
|---|
| End bp | 781818 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638009133 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_615827 |
|---|
| Protein GI | 103486266 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.921601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGCGA AACCAAGGGG ACAATCGATT CTGGCCAGAG ACGACATCCG CCGCGAATGG
GCCGATCATT ATTGGTGGTC GCAGGACGGC GTCCGGCTGC ACGCGCGCGT CTATCCCGCG
GTTGATGCAA GTGAAAGCTC CCCGCCGATC CTGTGTATGC CAGGACTGGC GCGCAACGCG
CGCGATTTCG AGGATTTGGC CCCGCATCTC GCGCAGCGGC GCCAGGTTAT CGTGATCGAG
TTTCGCGGTC GCGGCGAGAG CGCCTATGCC AGGGATCCGA TGACCTATGT GCCGCTCACC
TATGTGCAGG ATGTCGTGGC GCTGCTGGAC GATTTGGGCA TTGCGCGCTT TGCGACGATC
GGCACCTCGC TCGGCGGACT GGTGTCGATG CTGATGGCGG CGAGCCTGCC GGGGCGGATC
GTCGGCGCGG TGCTCAACGA TGTCGGACCC GAATTGCAGA CCGCGGGGCT GGATCGCATC
CGCGATTATA TCGGCGCGGG CGGCAGTCAG CCGACATGGA TGCACGCGGC GCGCGCCTTT
GCCGAACTCA ACGGCGCCAT CTATCCGAAC TATGGCATTC ACGACTGGCT GCGGCTCACC
AAGCGCACGC ACAAGCTGAC CCCCGAAGGG CGGATCGTTA CCGATTATGA CAAGCAGATC
GCGGCGCCGC TGCGGGTGCC GAACGGCGGC GACGCGGGCC TCGACCTGTG GCCCGCCTAT
CGCGCGCTCG GCGCGGTGCC GCTGCTGATC CTGCGCGGTG CGCTGTCGGA CATACTGGCG
CGCAGTGCGG CGGAAAAAAT GGCTGCCGAA CTGCCCGGCG CGCGCTTCGT CGAGGTGCCG
GGCGTCGGCC ACGCACCGAC GCTGGACGAG CCCGAAGCCC GCACCGCGAT CGACGCATGG
ATGGCGGAGT TGCCGCGCGC GTGA
|
|---|
| Protein sequence | MPAKPRGQSI LARDDIRREW ADHYWWSQDG VRLHARVYPA VDASESSPPI LCMPGLARNA
RDFEDLAPHL AQRRQVIVIE FRGRGESAYA RDPMTYVPLT YVQDVVALLD DLGIARFATI
GTSLGGLVSM LMAASLPGRI VGAVLNDVGP ELQTAGLDRI RDYIGAGGSQ PTWMHAARAF
AELNGAIYPN YGIHDWLRLT KRTHKLTPEG RIVTDYDKQI AAPLRVPNGG DAGLDLWPAY
RALGAVPLLI LRGALSDILA RSAAEKMAAE LPGARFVEVP GVGHAPTLDE PEARTAIDAW
MAELPRA
|
|---|
| |