| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0762 |
|---|
| Symbol | dcd |
|---|
| ID | 4080905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 770669 |
|---|
| End bp | 771223 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638009121 |
|---|
| Product | deoxycytidine triphosphate deaminase |
|---|
| Protein accession | YP_615815 |
|---|
| Protein GI | 103486254 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.139183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTC TTTCCGATCG CTGGATTCGC GAAGCCGCCC GGACGCAGGG CATGATCGAA
CCCTTTGTCG AGGCGCAGCG GCGCGATGGC TGCATCAGCT ATGGCCTCTC CTCCTACGGC
TATGACGCGC GCGTCGCGCC CGAGTTCAAG ATTTTCACCA ATGTCGACAG CACCATCGTC
GATCCCAAGG ATTTCGATCC CAAGAATTTC GTCGACCGCG AAACCGACGT CTGCATCATC
CCGCCGAACA GCTTCGCCCT CGCGCGCACC GTCGAGTATT TCCGCATCCC GCGCGATGTG
CTCGTCATCT GCCTTGGCAA ATCGACCTAT GCGCGTTGCG GTATCATCGT GAACGTCACC
CCGCTGGAAC CGGGGTGGGA GGGGCATGTG ACGCTGGAGT TTTCGAACAC CACCCCCCTG
CCCGCCAGGA TTTACGCCAA TGAAGGCGCC TGCCAGTTCC TCTTCCTTCA GGGCAATGAA
CCGTGCGAGA CGAGCTACGC CGACCGCGCG GGCAAATATA TGGGGCAGAA GGGCGTGACG
CTGCCGAAGC TGTAG
|
|---|
| Protein sequence | MAILSDRWIR EAARTQGMIE PFVEAQRRDG CISYGLSSYG YDARVAPEFK IFTNVDSTIV
DPKDFDPKNF VDRETDVCII PPNSFALART VEYFRIPRDV LVICLGKSTY ARCGIIVNVT
PLEPGWEGHV TLEFSNTTPL PARIYANEGA CQFLFLQGNE PCETSYADRA GKYMGQKGVT
LPKL
|
|---|
| |