| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0733 |
|---|
| Symbol | |
|---|
| ID | 4081353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 738816 |
|---|
| End bp | 739130 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638009092 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_615787 |
|---|
| Protein GI | 103486226 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2827] Predicted endonuclease containing a URI domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.579236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.484774 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCCG ACTTTCAGCC CTGCGCCTAT ATCATGGCGA GCGCGCGGCA CGGCACGCTC
TACACCGGCG TCACGTCGCA CCTGATCCAG CGCATCTGCC AGCACCGCGA CGGCAGTTTC
GACGGCTTCA CCAAACGCTA TGGCGTCAAG ACGCTCGTCT GGTTCGAACT CGCCGGGACG
ATGCACGCCG CGATCACGCG CGAAAAGCAA ATCAAGAATT GGCAGCGCAA GTGGAAGATC
GAACTGATCG AGGCGGCGAA CCCCGATTGG CGCGACTTGG CGGAGGAATT GGGGTTGCCG
CCGCTGGGGG CGTAG
|
|---|
| Protein sequence | MHADFQPCAY IMASARHGTL YTGVTSHLIQ RICQHRDGSF DGFTKRYGVK TLVWFELAGT
MHAAITREKQ IKNWQRKWKI ELIEAANPDW RDLAEELGLP PLGA
|
|---|
| |