Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0638 |
Symbol | |
ID | 4082574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 649954 |
End bp | 651387 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638008997 |
Product | aldehyde dehydrogenase |
Protein accession | YP_615692 |
Protein GI | 103486131 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00666091 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.103918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTGA AAGACGTCTA CCCACTCTAC CTCAACAACA AGGCCGCGCA GCCGAACAGC GACCTTGTCG TGACCGACAA GTACACTGGC GAGATCGCCT TCCGCACCGC GCTCGCGACC CCCGACGTGA TCGACGAAGC GATTGCGGGC GCGGTGCGCG CCGCCGAGCC GATGGCGCGG CTGGCGGGCT ATGAGAAGCG CGACGTGCTC AGCCATTGCG TCGCGCGTTT TCAGGAGCGG TTCGACGAGC TTGCCTATGC GCTCTGCGTC GAGGCGGGCA AGCCCATTGC CGATTCCGAG GGCGAGGTCA CGCGCCTGAT CGACACCTTC CGCATCGCCG CCGAAGAAGC GACGCGCAAT TATGGCGAGG TGCAGCCGCT CGACATTTCG CCGCGCGCCA GGGGCTATAT GGGGATGTGG AAGCGCGTGC CGATCGGGCC GTGCAGCTTT ATCTCGCCGT TCAACTTCCC GCTGAACCTC GCCGCGCACA AGATCGCGCC CGCGATCGCG ATGGGCTGCC CTTTTGTGAT GAAGCCCGCG TCGCTGACGC CCTTGGGCGC GATCATCATG GGCGAGGTGC TCGCCGAATG CGACGTCCTG CCCGAAGGTG CGTTCAGCAT ATTGCCCGCG AGCCGCGACG GCGCCGACCT GTTCACCACC GACGAGCGAT TGAAACTGCT CAGCTTCACA GGCTCGCCCG GCGTCGGCTG GGACCTGAAG GCCAAGGCGG GCAAGAAAAA GGTGGTGCTC GAACTCGGCG GCAACGCCGC GGTGGTCGTC GACCGCGACG CCGACCTCGA TCATGCGCTC GAACGCATCA TCTTCGGCGG CTATTACCAG TCAGGGCAAA GCTGCATCCA TGTGCAGCGC GCGATCATCC ACGCCGACGT CTACGACCGG TTCCGCGACA TGCTCACCGC GCGGGTCAGG ACGCTGAAAT CGGGCGATCC CAAGCAGCGC GACACCTTCA TCGGCCCGAT GATCTCGGCC AGGGAAGCGC AGCGGCTGAA GGGCTGGATC GACGATGCGG TCGCGGCGGG CGCCACCTTG CTCGCGGGCG GCGGGTGCGA CGGCAATATG CTGGAGGCGA CCTTGCTGGA GAATGTGCCC GGCGACAACG ACGTGGTGCG CGAAGAAGCC TTCGGTCCCG TCGTCATCCT GTCGAAGTTC ACCGACTGGG ACGCCGCCCT CGCCGAAGTC AACGACAGCA AGTTCGGGCT CCAGGCCGGC CTCTTCACGC GCGACCTGCA CAAGGTGCTG ACGGCGTGGG ACCATCTCGA CGTCGGCGGC ATCGTCGTCA ACGATGTGTC CTCCTATCGC GTCGACAACA TGCCCTATGG CGGGGTGAAA GACAGCGGGC TGGGCCGCGA GGGCGTGCGC TTTGCGATGG AAGACATGAG CGAAATCCGG AATCTGGTCA TCCGGAGAAC CTGA
|
Protein sequence | MKLKDVYPLY LNNKAAQPNS DLVVTDKYTG EIAFRTALAT PDVIDEAIAG AVRAAEPMAR LAGYEKRDVL SHCVARFQER FDELAYALCV EAGKPIADSE GEVTRLIDTF RIAAEEATRN YGEVQPLDIS PRARGYMGMW KRVPIGPCSF ISPFNFPLNL AAHKIAPAIA MGCPFVMKPA SLTPLGAIIM GEVLAECDVL PEGAFSILPA SRDGADLFTT DERLKLLSFT GSPGVGWDLK AKAGKKKVVL ELGGNAAVVV DRDADLDHAL ERIIFGGYYQ SGQSCIHVQR AIIHADVYDR FRDMLTARVR TLKSGDPKQR DTFIGPMISA REAQRLKGWI DDAVAAGATL LAGGGCDGNM LEATLLENVP GDNDVVREEA FGPVVILSKF TDWDAALAEV NDSKFGLQAG LFTRDLHKVL TAWDHLDVGG IVVNDVSSYR VDNMPYGGVK DSGLGREGVR FAMEDMSEIR NLVIRRT
|
| |