Gene Sala_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0577 
Symbol 
ID4082008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp588818 
End bp589216 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content67% 
IMG OID638008935 
ProductIojap-related protein 
Protein accessionYP_615631 
Protein GI103486070 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.258721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTCCG CCACCCAGGG GGCCGCGCCG GGCGCCGCTC CTGCCAATGA CAGCGTGGAC 
GCGCTCCACG CGCTGATCCT CCACCAGCTG GACGAGGACC AGGCCCAGGA AACCATCTCG
ATCCCGCTTG CCGGCAAGAG CAGCATCGCC GACCATATGG TGATCGCGAG CGGCCGTTCG
ACGCGCCACG TCTCGGCGAT TGCCGAAAAA CTGGCGCAGC GGATCAAGCA GGAAGCGGGC
CGTCCGGTTC GCGTCGAAGG GCTGCCCAAC GCCGATTGGG TGCTGCTCGA TGCGGGCGAC
GTCATCGTCC ACCTGTTCCG TCCCGAGGTT CGCAGCTTCT ATAACCTCGA ACGCATGTGG
TCGTTCGGCG ACGCGCCGCC GGTCGCAGCC GCGAATTGA
 
Protein sequence
MISATQGAAP GAAPANDSVD ALHALILHQL DEDQAQETIS IPLAGKSSIA DHMVIASGRS 
TRHVSAIAEK LAQRIKQEAG RPVRVEGLPN ADWVLLDAGD VIVHLFRPEV RSFYNLERMW
SFGDAPPVAA AN