| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0545 |
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| Symbol | |
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| ID | 4081435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 559479 |
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| End bp | 560273 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008903 |
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| Product | DNA uptake lipoprotein |
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| Protein accession | YP_615599 |
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| Protein GI | 103486038 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.686095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.234082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGTT TTGCACCCTC GCGCGCCGCT GTGCGCCTGC TCGCCGCCGC ATTCGTGATC
ACGCCCATGC TGGCGGCCTG CGCCGGTGGC GGCGGGGTCA AGCAGGATAC GCGCTATGTC
GCGCGCGACG TCAACACGCT CTACCGCGCC GCGCAGGAAC GGCTCGACCG CGGGCAATAC
GGCATTGCCG CCGCGCTGTT CGACGAGGTC GAGCGTCAGC ATCCCTATTC GCCCTGGGCG
CGCCGCGCAC AGCTGATGAG CTCGTTCAGC TATTATATGG ACCGCGAATA TACGCCGGCG
ATCGAGGCCG CGCAGCGCTT CCTCGCGATC CATCCGGGCA ACAAGGACGC ACCCTATGCC
TATTATCTGA TCGCGCTCAG CTATTATGAG CAGATCAGCG ACGTGACGCG CGACCAGCGG
ATCACGCAGC AGGCGCAGGC CGCGCTTGGC GAAATCGTGC GCCGCTATCC CGACAGCCGC
TATGCCGCCG ACGCGCGGCT CAAACTCGAC CTGGTACAGG ACCATCTGGC GGGCAAGGAG
ATGGAGATCG GGCGCTTTTA TCAGCGCAGC TCGAACTGGC TCGCCGCGTC GATCCGTTTC
CGCGAGGTGG TCGACAAATA TCAGACCACC AGCCACGCGC CCGAGGCGCT GTACCGCCTG
ACCGAATCCT ATCTCGCGCT CGGTATTCCG GAAGAAGCCA AAAAGTCCGC GGCGGTGCTC
GGCGCCAACT ATCCCGGCAA TGAATGGTAT GAGCGTGCGT ACAAACTGAT GCAGAAGCAC
GCACCGAGCG CATAG
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| Protein sequence | MTRFAPSRAA VRLLAAAFVI TPMLAACAGG GGVKQDTRYV ARDVNTLYRA AQERLDRGQY
GIAAALFDEV ERQHPYSPWA RRAQLMSSFS YYMDREYTPA IEAAQRFLAI HPGNKDAPYA
YYLIALSYYE QISDVTRDQR ITQQAQAALG EIVRRYPDSR YAADARLKLD LVQDHLAGKE
MEIGRFYQRS SNWLAASIRF REVVDKYQTT SHAPEALYRL TESYLALGIP EEAKKSAAVL
GANYPGNEWY ERAYKLMQKH APSA
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