Gene Sala_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0539 
Symbol 
ID4081429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp553586 
End bp554122 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content66% 
IMG OID638008897 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_615593 
Protein GI103486032 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.176236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.394655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACC GGCTCTATGT CGAGCTGACC GAGGGCGACC TTCGGCTCGT CAAGCTCGCC 
GAAGCACACC GCGAGGCGCT GCGCGCCGCT TGCGCCGCCG ATGGCGACGT CTGGCCGATC
TATTCGTCGA GTTACGATCC CGACCATTTC GACGCGAGTT TCACCGCGCT CATCGGCCAT
GAAAGCCGGA TGCCTTATGC GGTCATCGAA GGCGAGGCGC TGGTCGGCAT GACCGCGTGG
CTGCGTCCCG ATGTGTCGGC GCAGACGGTC GAGCTGGGTA ACAGCTATAT TCACCCCGGC
GCGCGCGGCA CCGGGCTCAA CGGCCGGGTC AAGCGGTTGA TGCTCGATCA CGCCTTTTCC
GTCGGTTTTC GCCGCGTCGA GTTCCGCATC GACGAGCGGA ACGGCCGGTC GCAGGCAGCG
GTCGCCAAGC TCGGCTGCAC GAAGGAGGGC GTGTTGCGCG CCGAGCGCAT CACCTGGACC
GGGCATGTGC GCGACACCGG GCTGTGGTCG ATCCTGGCGG AGGAGTGGAC GGGATAA
 
Protein sequence
MLDRLYVELT EGDLRLVKLA EAHREALRAA CAADGDVWPI YSSSYDPDHF DASFTALIGH 
ESRMPYAVIE GEALVGMTAW LRPDVSAQTV ELGNSYIHPG ARGTGLNGRV KRLMLDHAFS
VGFRRVEFRI DERNGRSQAA VAKLGCTKEG VLRAERITWT GHVRDTGLWS ILAEEWTG