Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0496 |
Symbol | |
ID | 4081386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 513849 |
End bp | 514859 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638008854 |
Product | threonine aldolase |
Protein accession | YP_615550 |
Protein GI | 103485989 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.96601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGA CCCGTTTCTT TTCGGACAAT GCCGCTGCGG TCCACCCCGC CGTGATGGAG GCGCTCGTCG CCGCCAACCA TGTCGATACA GCCTATGACG GCGACGCGCT CAGCCAGTCG CTCGACGCGG CCTTTTCGGA CCTGTTCGAA ACCGACTGCG AAGTCGTCTG GGTATCGACC GGGACCGCGG CGAACAGCAT CATCCTCGCG CATTTCGTCC GGCCGTGGCA GGGAATCCTC TGTTACGAGG AAGCGCATAT CGAGGTTGAC GAATGCGGCG CGCCGACCTT TTATTCGGGC GGCGCCACGC TGATGCCGCT CCCCGGCCGC GGCGCCAAGA TCGACACCGC GGCGCTGAAG GCGCGAATCG CGGGTATCCG GCAGGATGTC CACCAGGTTC AGCCCGCGGC GGTCAGCATC ACCAACGCGA CCGAATATGG CCTCGCGTGG CGGCCGCAGG AAATTGGCGA GATCAGCGAG ATTGCCAGGC GCAAGGGGCT GAAACTCCAC ATGGACGGCG CGCGCTTCGC CAACGCCGTC GCTTTCCTCG GCTGCGCGCC CGCCGACGTG ACCTGGCGCG CCGGGGTCGA TGCGCTGTCG TTCGGTTTCA CGAAGAATGG CGCGATGATG GCCGAAGCGA TCGTCTTTTT CGGCGGCAGC GGCGGCGCGG GGGTGCGCGA GCTCAAGAAG CGCGGCGGGC ACCTGCTCAG CAAGGGGCGC TTCGTCGCGG CACAGATTCG CGCGATGCTG AAGGACGACC TCTGGCTCGC CAATGCGCGC GCCGCCAATG CGGGCGCCGC GAAACTCGCG GCGGCGTGCG GTAGCCGCCT CCTGTATCCG GTCGAGGCGA ACGAGCTTTT CGTGCGGTTG TCCAATGACG AGGCGGCGAA ACTGCGCGGT GCGGGGTTCG ATTTTTACGA CTGGGGTGAG GGTGCGGCGC GGCTCGTCGT CAGCTGGGAT CAGGATGCCG AAGCGGTGGC GCCGCTCGCC GCCGCGATCG GTGCGCTATG A
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Protein sequence | MTATRFFSDN AAAVHPAVME ALVAANHVDT AYDGDALSQS LDAAFSDLFE TDCEVVWVST GTAANSIILA HFVRPWQGIL CYEEAHIEVD ECGAPTFYSG GATLMPLPGR GAKIDTAALK ARIAGIRQDV HQVQPAAVSI TNATEYGLAW RPQEIGEISE IARRKGLKLH MDGARFANAV AFLGCAPADV TWRAGVDALS FGFTKNGAMM AEAIVFFGGS GGAGVRELKK RGGHLLSKGR FVAAQIRAML KDDLWLANAR AANAGAAKLA AACGSRLLYP VEANELFVRL SNDEAAKLRG AGFDFYDWGE GAARLVVSWD QDAEAVAPLA AAIGAL
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