| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0463 |
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| Symbol | lysK |
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| ID | 4080952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 474351 |
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| End bp | 475952 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638008821 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_615517 |
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| Protein GI | 103485956 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1384] Lysyl-tRNA synthetase (class I) |
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| TIGRFAM ID | [TIGR00467] lysyl-tRNA synthetase, archaeal and spirochete |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0614307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC TGCATCTTCA TCCGTCGCTG CGCGAGGCTG CGCAAACGTC CAGGGCCTGG
CCGTTCGAGG AAGCGCGCAA GCTGGTCAAA CGCTATCCCG AAGGCAAGCC GGGCGGCGCG
CCTGTGCTGT TCGAGACCGG CTATGGCCCG TCGGGCTTGC CGCATATCGG CACCTTCAAC
GAAGTGCTGC GCACGACGAT GGTGCGGCGC GCCTATGAGA CGCTGACCGG CGGCGCGCCG
ACGCGGCTCG TCGCGTTCAG CGACGATATG GACGGCCTGA GGAAGGTGCC CGACAATGTG
CCGAACGGCG CCATGCTGCG CGAGCATCTG GGGCGGCCGC TGACCGCGAT CCCCGACCCG
TTCGGCAAAT ATGAGAGCTT TGCGCATCAC AATAATGCGA TGCTGCGCGA GTTCCTCGAC
CGCTTCGGTT TCGATTACGA GTTCGTCAGC TCGACCGAAC GCTACACATC GGGCGCGTTC
GACGAGGCGC TGAAGAATGT CCTGCGCCAC AATCAGGACA TACTCGACAT CATGCTGCCG
ACGCTGCGCG CCGAGCGCGC CGCGACCTAT TCGCCGGTGC TGCCGGTGAG CCCGAAGTCG
GGCATCGTGT TGCAGGTGCC GGTCACCGTC GTCGATGCCG AGGCGGGCCT CGTGTCGTTC
GAGGATGAAG GGGAGACGAT CACCCATTCG ATCCTGCGCG GCGGCGCCAA GCTCCAGTGG
AAGGTCGACT GGGCGATGCG CTGGGTCGCG CTGGGCGTCG ATTATGAAAT GTACGGCAAG
GATCTGACCG ACAGCGGCGT CCAGTCGGGC AAGATCGCCA GGGCGCTCGG CGGGCGCAAG
CCCGAGGGGC TGATCTATGA GATGTTCCTC GACGAAAAGG GCGAGAAGAT TTCGAAGTCG
AAGGGCAATG GCCTGTCGAT GGAGGAATGG CTGACCTATG GCAGCGAGGA AAGCCTGGCC
TTTTACGCCT ATCGCGAGCC CAAGGCGGCG AAGCAGCTGC ATATCGGCGT GGTGCCGAAA
GCGGTCGACG AATATCTGCA GATGCGCGGC ACCTATCCGG CGCAGGAGCC CGACAAGAGG
CTGGGCAACC CCGTGCATCA TGTCCATGTC GCGCGCGGTC AGGATGTGCC GGAGACGGTG
TTGCCGGTGA CATATGGCCT GCTGCTCAAC CTCGTCGGGG TGATGGGCGC CGATGCGTCG
AAGGAGCAGA TCTGGCGCTA CCTCGGTCAA TATGTCGCGG GAGCCGATGC GGCGACCTAT
CCCGAGCTCG ACCGGTTGAT CGACAATGCG ATGGCGTATA ACCGCGATTT CGTCGCGCCG
ACCTTGCAGC GCCGCAAGCC CGCGGGCGGC GAGGTCGCGG CGCTGCGCGA GCTCGATGCG
CGGCTCGCCG CGCTGCCCGC CGACGCCTCG GCCGACGACA TCCAGAATAT CGTCTATGAA
ATCGGCAAGG ACGAGGCGCA CGGCTTCGAC AATCTGCGCG ACTGGTTCAG GGCGCTGTAC
GAGACGCTGC TGGGATCGAG TGCGGGTCCG CGTATGGGCA GCTTTATCGC GCTGTTCGGG
GTGGAGAATA CGCGGCGGCT GATCGCGGAA GCGCTGGCGT GA
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| Protein sequence | MTDLHLHPSL REAAQTSRAW PFEEARKLVK RYPEGKPGGA PVLFETGYGP SGLPHIGTFN
EVLRTTMVRR AYETLTGGAP TRLVAFSDDM DGLRKVPDNV PNGAMLREHL GRPLTAIPDP
FGKYESFAHH NNAMLREFLD RFGFDYEFVS STERYTSGAF DEALKNVLRH NQDILDIMLP
TLRAERAATY SPVLPVSPKS GIVLQVPVTV VDAEAGLVSF EDEGETITHS ILRGGAKLQW
KVDWAMRWVA LGVDYEMYGK DLTDSGVQSG KIARALGGRK PEGLIYEMFL DEKGEKISKS
KGNGLSMEEW LTYGSEESLA FYAYREPKAA KQLHIGVVPK AVDEYLQMRG TYPAQEPDKR
LGNPVHHVHV ARGQDVPETV LPVTYGLLLN LVGVMGADAS KEQIWRYLGQ YVAGADAATY
PELDRLIDNA MAYNRDFVAP TLQRRKPAGG EVAALRELDA RLAALPADAS ADDIQNIVYE
IGKDEAHGFD NLRDWFRALY ETLLGSSAGP RMGSFIALFG VENTRRLIAE ALA
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