| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0454 |
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| Symbol | |
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| ID | 4080943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 465182 |
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| End bp | 466615 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638008812 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_615508 |
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| Protein GI | 103485947 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACC AGCCGACCTC CGCCGCCGCG CATCGTGCGC AGGGATTTCG CGACGAGTTT
CGCGCGACGC TGGCGCTTGC CTGGCCGCTG GTGCTCACCA ACCTGACGAT GTCGCTGATC
GGCGCGACCG ACGTGCTGAT GGTCGGGCGG CTGGGGCCGA CCGAGCTCGC GGCCTCGTCG
CTCGGCTTCA ACCTTGCGAT GCTGCTCGGC ATCTTCGGCA TGGGGCTGGT GATGGGGGCA
TCGCCGCTGA TGGCGAGCGA GATCGGGCGC CGCGCCAATT CGGTGCGCGA CATCCGGCGC
ACCTTTCGTC AGACGCTGTG GCTCGTCGCC ATCGTCGCGG TGCCGATGCT CGCCATCCTC
TGGAACACCG GCGCGATCCT GGACCTGCTC GGACAGGACC GGGCGCTGGC GGCGCTCGCG
CAGGATTATG TGCGCGCCTA TATGTGGTCG ATCCCGCTGT TCCTTGCGAC GCTGGCGTTC
CGCAACTTCC TTGCGGCGCT CGAACGGCCG ATGTGGTCGC TGGTCGTCGG GGTCGTCGGG
GTGCTCGGCA ATATCCTGTT CAACTATGCG CTGATCTTCG GCAAGTTCGG GATGCCCGCG
CTCGGCATCG TCGGCGCGGG TGTCGGCAGC GTGCTGACCA ATATGGTGAT GCTGCTGCTG
ATGGTCGGCG TCGTATATCG CGACCGGCAG TTCCGCCGCT ATCACCTGCT CGGTCGCTGG
TGGCGCAGCG ACTGGCCGCG CTTTGCCCAG ATGACGCGCA TCGGCACCCC CATCGCCGTC
AGCCATGCGT TCGAGGCCGG GGTCTTTTCG GCGGCGGTCA TGCTGATGGG CTGGATCTCG
ACCGCCGCGG TCGCGGCGCA CGCGGTCGCG CTGCAACTTG CCTCGCTGAC CTTCATGGTG
CCGATGGGGC TCGCGCAGGC GGCGACGGTG CGCGTCGGCA TCGGCCATGG CCGCGCCGAT
GCCCATCATA TCCGCCGTGC GGGCTGGACG AGTTTCGCCA TGGGCACGGG TTTCATGGCG
GCGATGGCGA TCATCATGCT GGCAATCCCC GGAACGCTCG CCGGCCTGTT CATCGACCGC
ACCAACCCCG CCAATGCCGA AGTCGCCGAA CTGGCGGTCA GCTTCCTGGT CATCGCGGCG
CTTTTTCAGG TCGCCGATGG CGCGCAGGTG GTGGCGCAGG GGATGCTGCG CGGCCTGCAC
GACACCTTTG TCCCGATGCT GTTCGCGCTT TTCGGTTACT GGGTGATCGG CATCGGTGTC
GGCGCCTGGC TGGCGTTCGA GCGCGGCTGG GGCGGGGTGG GCATATGGAC CGGCCTTGCC
ACCGGCCTCT CCATTGTGGC GGTGTTGATG CTCACCCGCT GGATGCAGCG CGAACGGCTG
GGGCTGGTGC GTCAGACGGC ACCCTTGCGC GAGAGTGTTG CAGCCCCCAT CTGA
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| Protein sequence | MLHQPTSAAA HRAQGFRDEF RATLALAWPL VLTNLTMSLI GATDVLMVGR LGPTELAASS
LGFNLAMLLG IFGMGLVMGA SPLMASEIGR RANSVRDIRR TFRQTLWLVA IVAVPMLAIL
WNTGAILDLL GQDRALAALA QDYVRAYMWS IPLFLATLAF RNFLAALERP MWSLVVGVVG
VLGNILFNYA LIFGKFGMPA LGIVGAGVGS VLTNMVMLLL MVGVVYRDRQ FRRYHLLGRW
WRSDWPRFAQ MTRIGTPIAV SHAFEAGVFS AAVMLMGWIS TAAVAAHAVA LQLASLTFMV
PMGLAQAATV RVGIGHGRAD AHHIRRAGWT SFAMGTGFMA AMAIIMLAIP GTLAGLFIDR
TNPANAEVAE LAVSFLVIAA LFQVADGAQV VAQGMLRGLH DTFVPMLFAL FGYWVIGIGV
GAWLAFERGW GGVGIWTGLA TGLSIVAVLM LTRWMQRERL GLVRQTAPLR ESVAAPI
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