| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0407 |
|---|
| Symbol | |
|---|
| ID | 4081726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 418042 |
|---|
| End bp | 418392 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638008765 |
|---|
| Product | transposase, IS4 |
|---|
| Protein accession | YP_615462 |
|---|
| Protein GI | 103485901 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.789806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.45974 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCATGC TGCTCAGCGA AGGGCAGATG AGCGAATACA AGGGCGCTGC GCTGATGATA
GATGCCTTCC CCAAGGTCAG GGCTTTGCTC GCCGATCGGG GCTACGATGC CGACTGGTTC
CGCGCCGCGC TGGCCGAGCG TGGCATAGCC GCCTGCATCC CGTCAAAGAA CAACCGCAAA
GTCCCCATTC CGCACGACAC AGCCCTCTAC CGCCAGCGCC ACAAGGTCGA GAACATGTTC
GGCAGGCTCA AGGACTGGCG ACGCATCCAC ACCCGCTACG ACCGATGCGC CCACACCTTC
ATGTCCGCCA TATGTATCGC TGCAACCGTC ATCTTCTGGC TGCCGCAATG A
|
|---|
| Protein sequence | MIMLLSEGQM SEYKGAALMI DAFPKVRALL ADRGYDADWF RAALAERGIA ACIPSKNNRK
VPIPHDTALY RQRHKVENMF GRLKDWRRIH TRYDRCAHTF MSAICIAATV IFWLPQ
|
|---|
| |