| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0406 |
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| Symbol | |
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| ID | 4081725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 415330 |
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| End bp | 417918 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008764 |
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| Product | ATPase AAA-2 |
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| Protein accession | YP_615461 |
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| Protein GI | 103485900 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.411662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG AGAAATTCAC CGACCGGGCC AAGGGCTTTC TACAGAGCGC CCAGACAGTT
GCCGTCCGCA TGAGCCATCA GCGCATCACG CCAGTCCATA TTCTCAAGGC ATTGCTCGAA
GATGAGGAGG GCATGGCCGC GCAGCTCATC CAGCGAGCAG GCGGTAGCCC CCCTGCCGCC
ATTGGCGAGG TTGAAAAGGC ATTGCATAAA TTCCCGGCGG TTTCCGGCTC CGGAGCGCAG
ACGCCGCCCG CCCTAGACAA TGATTCGGCT CGCCTGCTCG ATCAGGCCGA ACAGCTGGCA
AAGAAGGCCG GCGACAGCTT CGTTCCTGTA CAGCGCATAT TGCAGGCCAT GGCCCTTTCC
GACAGCACCG ACGCAGGCAA GGCTTTGCAG GCTGCCGGCG TAAATGCGAA GTCGCTCGAG
GCGGTGATTC AGGAAGTGAC CGGCGGTCGC ACCGCGGACA GCGCAAGCGC AGAAGAGAGC
TACGATGCGC TCAAGAAATA CGCCCGCGAC CTGACCCAAG CGGCGCGCGA CGGCAAGCTC
GACCCGGTGA TCGGCCGCGA CGAGGAGATT CGTCGCACAA TCCAGATTCT GGCCCGCAGG
ACCAAGAATA ATCCCGTTCT TATCGGTGAT CCCGGCGTGG GCAAGACCGC GATCGCCGAG
GGGCTGGCGC TGCGCATCGC CAATGGCGAT GTGCCCGACA GCCTCAAGGG CCGCACGCTA
ATGGCGCTTG ACATGGGCGC GCTGATTGCG GGAGCGAAAT ATCGCGGCGA ATTCGAGGAA
CGCTTGAAGG CCGTGATCGA CGAGGTGAAA AATTCCGATG GGCAGATCAT CCTGTTCATC
GACGAGATGC ACACGCTGAT TGGAGCGGGC GCGAGCGAGG GCAGCATGGA TGCCTCGAAC
CTCCTGAAGC CTGCGCTGTC GCGCGGCGAG TTGCACGTGA TCGGCGCGAC TACGCTCGAC
GAATACCAGA AATATGTCGA GAAGGATGCC GCACTCCAGA GGCGCTTCCA GCCGGTCTAT
ATCGACGAGC CGAGCGTAGA GGACACGATA TCGATCCTGC GTGGCCTGAA GGAAAAATAC
GAACTGCACC ACGGGGTAAA CATTACCGAC AGCGCGATCG TGGCCGCTGC GCAGCTATCC
GATCGCTATA TCCAGAACCG CTTCCTCCCC GACAAGGCGA TCGACCTGAT GGACGAGGCG
GCGAGTCGCA TCCGCATGGA AGTAGAAAGC AAACCCGAAG AGATCGAAAA CCTCGACCGC
CGCATTATCC AGCTCAAGAT CGAGGAAAGC GCGCTTGCTA AGGAAAGCGA CGAGGCGAGC
AAGGACCGGC TCGCCACCTT GCGCAAAGAA TTGGCCGAGC TCGAGCAGAA ATCGAGCGAG
CTGACCACGC GCTGGCAGAA CGAACGCGAC AAGATTCAGG CTGAGGCAAA GATCAAGGAA
CAGCTCGACC TGGCCCGGCT CGAACTGGAG CAGGCGCAGC GCGCGGGCGA CCTGCAAAAG
GCGGGCGAGT TGTCTTATGG CACGATACCG AGCCTCGAAA AGCAGCTTGA AGAGGCACGT
GGTGCAAATG AGACTGCGTT ATTGCGCGAG GAAGTGACCG AGGAGGACAT CGCCTCTGTC
GTTAGCCGCT GGACAGGCGT GCCGGTGGAC AAGATGATGG AGGGTGAGCG CGAGAAGCTG
CTCAAGATGG AAGAGTTTCT CGGTCGCCGC GTGATCGGCC AGCAGCAGGC GGTACAGGCT
GTCTCCAAGG CCGTGCGCCG AGCACGCGCA GGCTTGCAGG ATCCGAACCG GCCATTAGGC
AGCTTCCTGT TCCTTGGCCC CACGGGCGTT GGCAAAACCG AGCTGACCAA GGCTCTGGCC
GAGTTCATGT TCGGCGACGA GCGCGCCATG GTGCGCATCG ACATGAGCGA ATTCATGGAA
AAGCACGCGG TCGCCAGACT GATCGGCGCG CCTCCGGGTT ATGTTGGGTA CGAGGAAGGC
GGCGTGCTTA CCGAGGCGGT GCGGCGGCGA CCTTACCAGG TGGTGCTGTT CGACGAAGTT
GAGAAGGCGC ATCAGGACGT GTTCAACGTT CTGCTGCAGG TACTCGACGA CGGTCGCCTG
ACCGACGGGC AGGGCCGGGT GGTGGACTTC TCGAACACGC TGATCATCTT GACCAGCAAC
CTCGGCAGCC AGTTCCTCTC CAACCTCACC GACGATCAGA AGGTGGAAGA CGTCGAGCCG
CAGGTGATGG ACGTGGTGCG CAGCCACTTC CGCCCCGAGT TCCTCAACCG GCTTGATGAA
ATCATTCTGT TCCATCGCCT GAGCCAGGAG CACATGGCAC CGATCGTCGA TATCCAGGTC
AAGCGCGTCC AGAAGCTGCT GAAGGACCGG AAGATCACGC TCGACCTCAC CGAAGGCGCG
CGCAACTGGC TCGGTCGGGT GGGTTACGAC CCGGTATATG GCGCCAGACC GCTCAAGCGA
GCGGTACAGC GCTATCTGCA GGATCCGCTG GCGGAAAAGC TGCTGGCCGG CGAAATCCTT
GACGGTTCGA CCGTCAAGGT CGACGAGGGC GAAGAAGGTC TCGTTTTCGT CATTCCATCC
CAGATCTGA
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| Protein sequence | MNLEKFTDRA KGFLQSAQTV AVRMSHQRIT PVHILKALLE DEEGMAAQLI QRAGGSPPAA
IGEVEKALHK FPAVSGSGAQ TPPALDNDSA RLLDQAEQLA KKAGDSFVPV QRILQAMALS
DSTDAGKALQ AAGVNAKSLE AVIQEVTGGR TADSASAEES YDALKKYARD LTQAARDGKL
DPVIGRDEEI RRTIQILARR TKNNPVLIGD PGVGKTAIAE GLALRIANGD VPDSLKGRTL
MALDMGALIA GAKYRGEFEE RLKAVIDEVK NSDGQIILFI DEMHTLIGAG ASEGSMDASN
LLKPALSRGE LHVIGATTLD EYQKYVEKDA ALQRRFQPVY IDEPSVEDTI SILRGLKEKY
ELHHGVNITD SAIVAAAQLS DRYIQNRFLP DKAIDLMDEA ASRIRMEVES KPEEIENLDR
RIIQLKIEES ALAKESDEAS KDRLATLRKE LAELEQKSSE LTTRWQNERD KIQAEAKIKE
QLDLARLELE QAQRAGDLQK AGELSYGTIP SLEKQLEEAR GANETALLRE EVTEEDIASV
VSRWTGVPVD KMMEGEREKL LKMEEFLGRR VIGQQQAVQA VSKAVRRARA GLQDPNRPLG
SFLFLGPTGV GKTELTKALA EFMFGDERAM VRIDMSEFME KHAVARLIGA PPGYVGYEEG
GVLTEAVRRR PYQVVLFDEV EKAHQDVFNV LLQVLDDGRL TDGQGRVVDF SNTLIILTSN
LGSQFLSNLT DDQKVEDVEP QVMDVVRSHF RPEFLNRLDE IILFHRLSQE HMAPIVDIQV
KRVQKLLKDR KITLDLTEGA RNWLGRVGYD PVYGARPLKR AVQRYLQDPL AEKLLAGEIL
DGSTVKVDEG EEGLVFVIPS QI
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