| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0402 |
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| Symbol | dnaK |
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| ID | 4081721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 411015 |
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| End bp | 412946 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008760 |
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| Product | molecular chaperone DnaK |
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| Protein accession | YP_615457 |
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| Protein GI | 103485896 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.362768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.130805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAG TTATCGGTAT CGATCTCGGA ACAACCAACA GCTGCGTTGC CGTTATGGAA
GGCGGCAAGC CCAAGGTGAT CGAGAATTCG GAGGGTGCGC GCACCACGCC ATCGATCGTC
GCCTTCACCA AGGATGGCGA ACGCCTGATC GGCCAGCCCG CCAAGCGCCA GGCCGTTACC
AACCCGGATA ACACCTTGTT CGCGATCAAG CGCCTGATCG GTCGGCGGTT TGACGATCCG
ACCACCAAGA AAGACATGGA ACTTGTTCCA TACAAGATTG TCGAGGGGCC CAACGGCGAT
GCTTGGGTTG AAGCGGCCGG CGAGAAGTAC AGTCCTTCCC AGGTTTCCGC CTTCATCCTG
CAAAAGATGA AGGAAACCGC CGAAGAGTAC CTAGGCGAGA AGGTCGAGAA AGCGGTAATA
ACAGTCCCGG CCTACTTCAA TGATGCCCAG CGCCAGGCGA CCAAGGATGC CGGTAGAATC
GCTGGTCTCG AGGTCGAGCG CATCATCAAC GAACCGACTG CGGCGGCGCT CGCTTATGGT
CTCGACAAGG ATGAAGGCAA GACTATTGCC GTTTACGACC TCGGCGGCGG TACGTTTGAC
GTATCGATCC TCGAAATCGG TGATGGCGTA TTCGAGGTGA AATCGACCAA TGGCGACACC
TTCCTCGGCG GCGAAGACTT CGACAGCGCG GTGGTGGAAT ATCTCGCCGA TTCCTTCAAG
AAGAAGGAAA ATATGGACCT CAGAACCGAC AAGCTCGCCC TGCAGCGCCT CAAGGAAGCG
GCGGAAAAGG CCAAGATAGA GCTGTCAAGC GCAGCACAGA CCGAAATCAA CCTTCCCTTT
ATTACTGCGC GCATGGAAGG CGGCACCACG ACGCCGCTGC ATTTGGTCCA GACAGTCACC
CGCTCCGAAC TCGAAAAACT GGTTGACGGT CTGATCAAGC GCACGCTCGA ACCCTGCAAA
AAAGCTATGG CTGATGCTGG GATCGACAAA GGGGCGATAG ACGAAGTGAT ACTGGTGGGC
GGCATGACGA GAATGCCCAA GGTACGCGAA GTGGTCGAGG ATTTCTTTGG CAAGAAGCCG
CACACTGGCG TTAACCCCGA CGAGGTTGTC GCCATGGGTG CCGCCATCCA GGCGGGTGTC
TTGCAGGGCG ACGTCGAGGA TGTTCTCCTG CTCGACGTGA CCCCGCTGTC GCTCGGTATC
GAGACGCTGG GCGGCGTATT CACCCGCATG ATCGATCGCA ACACCACGAT CCCGACCAAG
AAAACCCAGA CCTACTCCAC TGCGGATGAC AACCAGCAAG CGGTGACCAT CCGCGTGTTC
CAGGGTGAGC GTGAAATGGC GGCGGACAAC AAGCTGCTCG GCCAGTTCGA TCTCGTCGGC
ATCCCGCCAG CGCCGCGCGG CGTGCCGCAG ATCGAAGTCA CTTTCGACAT TGACGCCAAC
GGCATCGTCA ACGTTTCGGC CAAGGACAAG GGCACCGGCA AGGAACAGCA GATCCGTATC
CAGGCATCGG GCGGTCTCAG CGAAGCCGAC ATTGACCAGA TGGTGCGTGA TGCCGAGAAG
TTCGCCGAGG AAGACAAGAA GCGGCGTGAA GCCGCCGAGG CTCGCAACCA GGCCGACAGC
CTGGTCCATG CGACCGAAAA GCAGCTCGAA GAGCATGGCG ACAAGATTGA TGCCGACACC
AAGGCAGCCG TCGAAGCTGC GATCGCCGAA ACCAAGACGG CGCTTGAAGG CGACGATCAC
GATGCGATCA ACGCGAAGGC TCAGGCCCTC ACCGACGCTG CCATGAAGAT GGGTCAGCAG
ATCTACGAGA AGGAGCAGGC CTCTGCCGCC GGCTCTGCCG ATGCCGGTAG AGCTGCCGGT
TCGGAAGCTT CGGATGATGA AGAAGTCGTC GACGCCGAAT TCTCCGAGGT CGATGATGAC
AAGAAAGACT AA
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| Protein sequence | MAKVIGIDLG TTNSCVAVME GGKPKVIENS EGARTTPSIV AFTKDGERLI GQPAKRQAVT
NPDNTLFAIK RLIGRRFDDP TTKKDMELVP YKIVEGPNGD AWVEAAGEKY SPSQVSAFIL
QKMKETAEEY LGEKVEKAVI TVPAYFNDAQ RQATKDAGRI AGLEVERIIN EPTAAALAYG
LDKDEGKTIA VYDLGGGTFD VSILEIGDGV FEVKSTNGDT FLGGEDFDSA VVEYLADSFK
KKENMDLRTD KLALQRLKEA AEKAKIELSS AAQTEINLPF ITARMEGGTT TPLHLVQTVT
RSELEKLVDG LIKRTLEPCK KAMADAGIDK GAIDEVILVG GMTRMPKVRE VVEDFFGKKP
HTGVNPDEVV AMGAAIQAGV LQGDVEDVLL LDVTPLSLGI ETLGGVFTRM IDRNTTIPTK
KTQTYSTADD NQQAVTIRVF QGEREMAADN KLLGQFDLVG IPPAPRGVPQ IEVTFDIDAN
GIVNVSAKDK GTGKEQQIRI QASGGLSEAD IDQMVRDAEK FAEEDKKRRE AAEARNQADS
LVHATEKQLE EHGDKIDADT KAAVEAAIAE TKTALEGDDH DAINAKAQAL TDAAMKMGQQ
IYEKEQASAA GSADAGRAAG SEASDDEEVV DAEFSEVDDD KKD
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