Gene Sala_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0376 
Symbol 
ID4081963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp388342 
End bp388806 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID638008735 
Productferric uptake regulator family protein 
Protein accessionYP_615432 
Protein GI103485871 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.872531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGC ATGACCATCC GCACGTCGAA GCCAGCGGCG CCTCGCTCGC CAGGGCGGCG 
CAGGCCGCGC TCGAAGGCGC GGGCGAAGCG TGGACCGACA TGCGCGCCGA GATTTTCGAC
GCAGTCGCCG CGATCGGCAA GCCCGCGAGC GCTTATGAGA TCGCCGACAT CGTCTCGCAA
AAGCGCGGGA AGCGCGTCGC GCCGAACAGC GTCTATCGCA TTCTCGACCT GTTCGTCGCG
AACAACCTCG TCCGCCGGGT CGAGAGCGCT AACGCCTTTG TCGCCAACAG CCATCCCGGC
TGCCTGCACG ACTGCATCTT TCTGATCTGC GATACGTGCG GCACCGCGGT GCATGTCGAT
GACGACACGC TGTCGACCGG GGTGCGCGCC GCCGCCGAAA AGACGGGTTT CGCCGCCGAA
CGCCCGGTGA TCGAAGTGCG CGGTAAATGC GCCGAGTGCC AATAG
 
Protein sequence
MGKHDHPHVE ASGASLARAA QAALEGAGEA WTDMRAEIFD AVAAIGKPAS AYEIADIVSQ 
KRGKRVAPNS VYRILDLFVA NNLVRRVESA NAFVANSHPG CLHDCIFLIC DTCGTAVHVD
DDTLSTGVRA AAEKTGFAAE RPVIEVRGKC AECQ