Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0376 |
Symbol | |
ID | 4081963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 388342 |
End bp | 388806 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638008735 |
Product | ferric uptake regulator family protein |
Protein accession | YP_615432 |
Protein GI | 103485871 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.872531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGC ATGACCATCC GCACGTCGAA GCCAGCGGCG CCTCGCTCGC CAGGGCGGCG CAGGCCGCGC TCGAAGGCGC GGGCGAAGCG TGGACCGACA TGCGCGCCGA GATTTTCGAC GCAGTCGCCG CGATCGGCAA GCCCGCGAGC GCTTATGAGA TCGCCGACAT CGTCTCGCAA AAGCGCGGGA AGCGCGTCGC GCCGAACAGC GTCTATCGCA TTCTCGACCT GTTCGTCGCG AACAACCTCG TCCGCCGGGT CGAGAGCGCT AACGCCTTTG TCGCCAACAG CCATCCCGGC TGCCTGCACG ACTGCATCTT TCTGATCTGC GATACGTGCG GCACCGCGGT GCATGTCGAT GACGACACGC TGTCGACCGG GGTGCGCGCC GCCGCCGAAA AGACGGGTTT CGCCGCCGAA CGCCCGGTGA TCGAAGTGCG CGGTAAATGC GCCGAGTGCC AATAG
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Protein sequence | MGKHDHPHVE ASGASLARAA QAALEGAGEA WTDMRAEIFD AVAAIGKPAS AYEIADIVSQ KRGKRVAPNS VYRILDLFVA NNLVRRVESA NAFVANSHPG CLHDCIFLIC DTCGTAVHVD DDTLSTGVRA AAEKTGFAAE RPVIEVRGKC AECQ
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