Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0365 |
Symbol | |
ID | 4081237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 376582 |
End bp | 377292 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638008724 |
Product | (Acyl-carrier protein) phosphodiesterase |
Protein accession | YP_615421 |
Protein GI | 103485860 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.393782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAT TGAATCCCGC CGCCCTCCGC CTGCTGCACA TCGATTCCAG CGCCCGCCCC GGCGTGTCGG GCCGCGATCC GCACGGGTCG CACACCCGCC GCCTCGGCGC GCGCTTTGTC GAACGCTGGA CCGCGCTGCG CCCGACCGAC GCGGTGACCT ATCGCGACGT CGGCCAGCAT CCGCCCGCGC CGGTCGATGC CGACTGGGTG GCCGCGGCCT TCACGCGGCC TGAAAAGCGC GACGCGGCGC AAAAGGCCCG GCTCGCCGAA AGCGACCGGC TCATCGCCGA ACTGATCGCG GCGGACATCG TGATCGTTGG CGCGCCGATG TATAATTTCG GAATGCCCGC GACGCTCAAG GCGTGGCTCG ACAATATCGT GCGCGTCGGC GTCACCTTCG GCTTCGACCG CGCCCGCGAC GGCGACCCCT ATTGGCCGAT GCTGCCCGCG GGCAAAACGC TGGTGACGCT CTCGGCGCGC GGCGACTATG GTTACGATCC GGGCGGGCGG CAGGCGCACA ATAATTTCGT CGAATCGGGG CTCGCTGCGC CGCTCGCCTA TATCGGCCTG CACGACAATC ACATGATCGC GATCGAATAT GACGAGTTCG GCGATCAACG ACTGGCCGAC TCGATCGCAG CCGCCGAACA GGCAGTCGAT GCGCTGGTCG ACCGCCTGAT CCTCGAACCA CGGACTCTCG AACCCGCCTG A
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Protein sequence | MFELNPAALR LLHIDSSARP GVSGRDPHGS HTRRLGARFV ERWTALRPTD AVTYRDVGQH PPAPVDADWV AAAFTRPEKR DAAQKARLAE SDRLIAELIA ADIVIVGAPM YNFGMPATLK AWLDNIVRVG VTFGFDRARD GDPYWPMLPA GKTLVTLSAR GDYGYDPGGR QAHNNFVESG LAAPLAYIGL HDNHMIAIEY DEFGDQRLAD SIAAAEQAVD ALVDRLILEP RTLEPA
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