Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0342 |
Symbol | |
ID | 4081040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 344728 |
End bp | 345501 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638008701 |
Product | arginyl-tRNA-protein transferase |
Protein accession | YP_615398 |
Protein GI | 103485837 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2935] Putative arginyl-tRNA:protein arginylyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.287506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGCAC CGTTCCGTTT TCCGCGCTTT TTCGTCACCA GCCCGGCGCC GTGCCCCTAT CTGGCGGGCA GGACCGAACG CAAGGTTTTC ACTGAGCTCA GCGGAAACAA TGCAACCGAA CTCAACGACG CGCTGGGCCG GATCGGCTTT CGCCGCAGCC AGTCGGTCGC CTATCGCCCG AGCTGCGCCG ATTGTTCGGC GTGCGTTTCG GTGCGCGTCT GCGCGAGCGA GTTTGCGCCG AGCAACTCAC AGAAGCGCAC GCTGCGCCGC AACGGCGATC TGGTCGTCAC GGCGTGCAAG CCGTGGGCCA CCGAAGAGCA ATATGCGCTG CTGCGCTCCT ATCTCGCCTC GCGCCACCCC GACGGCGGCA TGGCCGACAT GGACGAGCAG GATTTTGCCG ACATGGTCGA ACAGACCCCG GTGGACAGCT ATATGATCGA ATATCGCGAG CCGGTGGCGG GCGGCGGCAA GGGGCGGCTT GTCGGCTGTT GCCTGACCGA CCGGCAGGGC GACGGGCTGT CGATGATCTA CAGCTTTTTC GATGCGCATC ATCCGCTGCG CGAGGGGCTG GGCACCTACA TCATCGCCGA CCATGTGTTG CGCGCCGCCA AGGCGGGGCT GCCCTATGTC TACCTGGGCT ACTGGATCGA GGGATCGGCG CGCATGGCGT ACAAGGCACG CTTCCGCCCG CTCGAAAAGC TCGGCCCCGA TGGCTGGTCA CGCTTCGAGC CGACGCCGTC GGAGCGGATC GCGGCGATGT TCGAACTGGC TTGA
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Protein sequence | MSAPFRFPRF FVTSPAPCPY LAGRTERKVF TELSGNNATE LNDALGRIGF RRSQSVAYRP SCADCSACVS VRVCASEFAP SNSQKRTLRR NGDLVVTACK PWATEEQYAL LRSYLASRHP DGGMADMDEQ DFADMVEQTP VDSYMIEYRE PVAGGGKGRL VGCCLTDRQG DGLSMIYSFF DAHHPLREGL GTYIIADHVL RAAKAGLPYV YLGYWIEGSA RMAYKARFRP LEKLGPDGWS RFEPTPSERI AAMFELA
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