| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0317 |
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| Symbol | |
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| ID | 4082348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 325819 |
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| End bp | 327036 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638008676 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_615373 |
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| Protein GI | 103485812 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.47036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATT ATCGCTATGT GGCGATCGAT CCCGCAGGCC GCGAGCGCAA GGGGCGGTTG
ACCGCCGCGA ACGACGATGC CGCGCGCGCC GACCTGATCC GCCGCAAGTT CCACATCGTC
GTGGTCGAGG AGGCGGGGAC GAAGGCCGGA TCGGGACGTT CGCTGCTCGC CTTTCGCAAG
GACCGGCTTG GCCGCAAGGA ACTGGCGCTT TTCACGCGCC AGCTCGCGAC GCTCGCCGAG
GTCGCGCCGC TCGAAGAGGC GCTGCGCACG CTGACGCGCC AGAGCGAGGC CGAAAGCGCG
CGCGGGGTGA TTGCCGACGT TCATGCCGGG CTGCTTGAGG GGCGCCGCCT TGCCGACGCG
ATGGCGCGCC AGCCGACGAG TTTTCCGCCG CTCTACCGTG CGATGGTCGC GGCGGGCGAA
ACCACGGGCA GCCTGACGGT GATCCTCGCA CGACTCGCCG ACCTGCTCGA ACGCCAGGCC
GAAGTGCGCG GCAAGCTGAT CGCCGCGCTC GCTTATCCCA TCGTGCTCGC GGTCGTCGCG
ATCGGCGTCG TCGCGGCGCT GATGATTTTT GTCGTCCCGC GCGTCGTCGA ACAATTTACC
GACACCGGCC AGCGATTGCC CTTTCTGACC CGCGCGGTGA TCGGCGTGTC CAGCTTTGCC
GCGAACTGGT GGTGGCTCAT CGCGCTGCTG ATGGTCGCTG CGGCCTTCGG CTGGGCGGCG
GCGATACGCC GCCCGGCCTT CAAGGCGCGC GTCGATGCGC GGCTGCTCCG CCTGCCGCTG
CTCGGCCGCC TGCTCCGTGA TCTTTATGCC GCGCGGTTCG CGCGCACCCT CGCGACGATG
GTGTCGAGCC GCCTGCCGCT CGTCGAGGGG TTGCGGCTGA CCTTGCCGAC GATCCGCAAT
GCGGCGCTGG CGAGCGCCAC CGCGGGACTT GTCGATCAGG TGCGCGCCGG GGGCAGCCTG
TCGGCGGCGC TGCGCGATGC GGGGGTTTTC CCGCCGCTGC TCGTCTATAT GACCGCGAGC
GGCGAAAGCG CCGGGCGGCT GGAAGTAATG CTCGAACGCG CGGCCGATTA TCTGGAGCGC
GAGTTCGACC GCTTCACCGC CGCGTCGATG GCGCTTCTCG AACCTGTCAT AATTGTCGTT
ATGGGGTCAT GTGTTGCCCT TATCATCCTC GCCATTCTGC TGCCGATCCT TCAGTTGCAG
AATCTAGCCG GACTGTAA
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| Protein sequence | MPDYRYVAID PAGRERKGRL TAANDDAARA DLIRRKFHIV VVEEAGTKAG SGRSLLAFRK
DRLGRKELAL FTRQLATLAE VAPLEEALRT LTRQSEAESA RGVIADVHAG LLEGRRLADA
MARQPTSFPP LYRAMVAAGE TTGSLTVILA RLADLLERQA EVRGKLIAAL AYPIVLAVVA
IGVVAALMIF VVPRVVEQFT DTGQRLPFLT RAVIGVSSFA ANWWWLIALL MVAAAFGWAA
AIRRPAFKAR VDARLLRLPL LGRLLRDLYA ARFARTLATM VSSRLPLVEG LRLTLPTIRN
AALASATAGL VDQVRAGGSL SAALRDAGVF PPLLVYMTAS GESAGRLEVM LERAADYLER
EFDRFTAASM ALLEPVIIVV MGSCVALIIL AILLPILQLQ NLAGL
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