| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0251 |
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| Symbol | |
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| ID | 4083109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 254531 |
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| End bp | 255073 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008609 |
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| Product | peptide deformylase |
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| Protein accession | YP_615307 |
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| Protein GI | 103485746 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.142586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCA TGGCCATCCT ACCCATCATC GAGACGCCGG ACCCCCGGCT GCGCGTCATT
TCCAAGCCCG TCGAGACCTT CGACGCCGAG CTGAAGCAGC TTGTCGCCGA CATGTTCGAG
ACGATGTACG ACGCCCCAGG CATCGGGCTC GCCGCGATCC AGGTCGGGGT GCCGAAGCGC
ATCCTGGTGA TCGACCTGCA GGAAGCCGAT CCCGAAGACC CCGAGGGCAA GAAGGTGATC
CGAACCCCTC GCGTCTTCAT CAACCCCGTC TTTTCGGACT TTTCGGACGA GCATAGCGTC
TATCAGGAAG GCTGCCTGTC GGTCCCCGAA CAATATGCCG ATGTGACGCG CCCCGCCGAA
GTCACCGTCG ACTGGCAGGA CGAGGACGGC AAGCATCACC AGGAACGCAT GACCGGCCTG
ATGGCGACGT GCATCCAGCA CGAGCATGAC CATCTGGAAG GTATTTTGTT CATCGACCAT
CTGTCGCGGC TGAAGCGCGA GATGGTGCTG AAAAAGCTCG CAAAGCTGCG CAAGGCGGCG
TGA
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| Protein sequence | MASMAILPII ETPDPRLRVI SKPVETFDAE LKQLVADMFE TMYDAPGIGL AAIQVGVPKR
ILVIDLQEAD PEDPEGKKVI RTPRVFINPV FSDFSDEHSV YQEGCLSVPE QYADVTRPAE
VTVDWQDEDG KHHQERMTGL MATCIQHEHD HLEGILFIDH LSRLKREMVL KKLAKLRKAA
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