| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0227 |
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| Symbol | |
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| ID | 4083007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 234774 |
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| End bp | 236156 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008586 |
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| Product | hypothetical protein |
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| Protein accession | YP_615284 |
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| Protein GI | 103485723 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | [TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.604472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGACC TGGTCTTCGT CGCCTTTCTG TTCGCTTTCA TCGGGACCGG CTTTCGCAAG
CCGTTCCTGT TCATCCTCTG CTTCTGCTAC ATCGACATCG TCGCGCCGCA GCGGCTGAGC
TATTTCCTCA TCAATTCGAT CCCCGTCTCG CTGATCGTGT TCGGCCTCGC CATCGTCGGC
TGGCTTGTCG CCGACGACAA GCGCGACACC AGATGGTCGG GGCGGCAGAC CCTGCTCGTA
CTCATCCTCG GCTATTGCTG GATGACGACG ATCCAGGCCG ATTTCCCGGT CGAGGCGGCG
GACAAATGGA GCTGGGTTTG GAAGGCGCTG CTCTGGGCGA TCTTCCTGCC GCTCACCCTG
CGCACCAGGC TGCGCATCGA GGCGCTTGCG CTCATCATGT TGCTGTCCGC CGCGTCGATC
GCGATCGCGG GCGGCATCAA GACCGCGGCG GGCGGCGGCG GTTACGGGAC GCTCCAGCTG
CTGCTCAACG AAAATTACGG GCTCTACGAA GGGTCGATCA TGTCGACGGT CGGCATCGCG
ATCATCCCTC TCATCCTCTG GTACCGACGC CACGGGACGA TCTTTCCGCC CGACTGGCGC
GTGTCGCTCT TCGCTTTCGC GCTTTGTTTC GCGTGCATGT TGCTCCCCGT GGGGACGCAG
GCGCGCACCG GGCTCGTCTG TCTCGCGGTG CTCGCGGTGC TGTCGCTGCG CGCGGTCAGG
CACCGCTTTC TCTATATCAC CGGGGCGGGG CTGCTCGCCA TCGCCGCCAT TCCCTTCCTG
CCGCAAAGCT TTACCGAGCG CATGGAAACG ATCCGCAACC ACCGCGCGGA CCAGTCGGCT
TCCACCCGCG TCGCGGTGTG GCAGTGGACA TGGGACTATG CCAAGGAAAA CCCCTTCGGC
GGCGGTTTCG AGGCCTATAT CCAGAACCGC GTGCGCGTCG AAAAGGCGGC GAGCGATTAT
GACCCCGATG CCCCGCAGAA CGCCGAACCG ACGGTGTATG AAGAACAGTC GCGCGCCTAT
CATTCGAGCT ATTTCGAGAT GCTCGGCGAA CAGGGTTATC CGGGCCTCGC GCTCTGGCTG
CTCCTCCACG CGATCGGTCT CGCCCGCATG GAACAGCTCC GACGCCGCTA CCTCAGGACG
CGCCGCGCCG AAGAGCAGTG GATTGCACCG CTGGCGACCG CGCTTCAGCA CGGCCATATC
ATCTATATGG TCGGATCTCT TTTCGTCGGC ATCGCCTTCC AGCCGTTCAT CTACATGATG
CTCGCGCTCG AAATCGGGCT GACAACCTAT TGCCGCCGCC GCGAACGGGA AGCGGGATGG
CGCCCGCTGA TGGCGCGTCC GGCGCAGGTC CCGGCACGCC ATACACAACC TGCAAACCCC
TAG
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| Protein sequence | MRDLVFVAFL FAFIGTGFRK PFLFILCFCY IDIVAPQRLS YFLINSIPVS LIVFGLAIVG
WLVADDKRDT RWSGRQTLLV LILGYCWMTT IQADFPVEAA DKWSWVWKAL LWAIFLPLTL
RTRLRIEALA LIMLLSAASI AIAGGIKTAA GGGGYGTLQL LLNENYGLYE GSIMSTVGIA
IIPLILWYRR HGTIFPPDWR VSLFAFALCF ACMLLPVGTQ ARTGLVCLAV LAVLSLRAVR
HRFLYITGAG LLAIAAIPFL PQSFTERMET IRNHRADQSA STRVAVWQWT WDYAKENPFG
GGFEAYIQNR VRVEKAASDY DPDAPQNAEP TVYEEQSRAY HSSYFEMLGE QGYPGLALWL
LLHAIGLARM EQLRRRYLRT RRAEEQWIAP LATALQHGHI IYMVGSLFVG IAFQPFIYMM
LALEIGLTTY CRRREREAGW RPLMARPAQV PARHTQPANP
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