| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0193 |
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| Symbol | |
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| ID | 4082302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 204922 |
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| End bp | 206478 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638008552 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_615250 |
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| Protein GI | 103485689 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
[COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0459706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAAGAC CGCAGCCGCA TCTGGATGAA GTGCTCGCGT CCGAGCCCGG ATCGCATATC
GCCGCGCTTT TCGATTTCGA CGGAACGATC ATCGCCGGCT ATTCGGCGAC CGCGATGCTG
CGCGAAAAGT TCCAGCGCCG CGAAATGTCG GTCGAGGAGA TTGCCGAAAC CGCACAGGTG
ATCGCGCAGC ATAGCCTGGG CCAGATCGGC TTTTCCGGCC TGATGACTGC CGCCGCCAGA
TTCATGAAGG GGGTCGACGA GCAAAGCTTC ATCGACTTCG GCGAGGAACT CTACCGCAAG
CATATCGCGC GCAAAATCTA TCCCGAAACG CGCGCGATCA TCGAGGCGCA TCAGGCCAAG
GGTCATCGCG TCGCAATCAT CTCGTCGGCG ACGATCTACC AGATCGAACC GACCGCGCGC
GATCTCGGCA TCACGGACAT CAAATGCTCG GCCTATGAGA TCGAGGACGG GGTTTTCACC
GGCGAAATCA TCCGCCCGCT CTGTTTCGGC GAGGGCAAGG TGCTCGCCGC CGAGGACCTT
GCCGCCGACT ATGGCCTCGA TCTCGATCAG AGCTATTTCT ATTCGGACAG CGACGACGAT
ATCGAACTTT TGGAGCGCGT CGGCAAACCG CGTCCGCTCA ACCCGAACAT GAAATTAAAG
GCGATCGCCG ACGAGCGCGG CTGGCCGGTG CAGCGCTTTG CAAGCCGCGG CACACCGTCG
TGGATCGACT ATGCCCGCAC CCTCTATGCC ACCGGCTCGC TCGTCGGCGC CTTCGCCGCG
GGCCTGCCGA TCTGGGCGCT CACCCGCTCG CAGCGCGAGG CGGTCAATTT CTCGATGGGG
CTGTTCGGCG ACTTCGCCAC TGCGATCACC GGTGTCGAGC TGGAGGTCGA GGGCGAGCGC
CACCTCTGGT CGTCGCGCCC CTGCGTCTTC GTCTTCAACC ATCAGAGCAA GGCCGATGTA
ATGATCCTCG CCAAGCTCAT CCGCCGCGAC ATGGGCGGGG TGGGCAAGAA GGAGATCAGG
GACATCCCCA TCCTCGGCAA GCTGATGGAA TGGGGCGGCA CCGTCTTCGT CGACCGCGCC
GATGGAAAGA GCGCGATCAA GGCGATGGAA CCGCTGATCG ATGCGATCCA GAAGGAAGGC
AAGTCGATCT GCATCGCGCC CGAAGGGACG CGCAGCCTGA CCCCGAAGCT CGAACCCTTC
AAAAAGGGCG CTTTCCACCT CGCGATGCAG GCCGGTGTCC CGATCGTCCC GATCGTGATT
CATAACGCCA CGGACGTCGC GCCGAAGAAC GAGTTTGTGA TGCGCCCCGC GACGGTGCGC
GTCACCGTGC TGCCGCCCGT CGATACGTCG GGGTGGAGCG TCCGCACGAT CAACAACCAT
GTCCGTGACG TGCGCAACAT GTTCCTGCGC ACGCTGGGGC AGCCGCAGGA AAGCGTCGCG
GAATCGGTGG CGAGGGAAGC TGCGGTCGAG GCAAAGGGGG AAAAGACTCC GAAGAAGGCG
GCCACCAAAA GGGCCGCGCC GAAGAAGAAG GCAACCGGAA AGAGCGCCAA GGCATGA
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| Protein sequence | MPRPQPHLDE VLASEPGSHI AALFDFDGTI IAGYSATAML REKFQRREMS VEEIAETAQV
IAQHSLGQIG FSGLMTAAAR FMKGVDEQSF IDFGEELYRK HIARKIYPET RAIIEAHQAK
GHRVAIISSA TIYQIEPTAR DLGITDIKCS AYEIEDGVFT GEIIRPLCFG EGKVLAAEDL
AADYGLDLDQ SYFYSDSDDD IELLERVGKP RPLNPNMKLK AIADERGWPV QRFASRGTPS
WIDYARTLYA TGSLVGAFAA GLPIWALTRS QREAVNFSMG LFGDFATAIT GVELEVEGER
HLWSSRPCVF VFNHQSKADV MILAKLIRRD MGGVGKKEIR DIPILGKLME WGGTVFVDRA
DGKSAIKAME PLIDAIQKEG KSICIAPEGT RSLTPKLEPF KKGAFHLAMQ AGVPIVPIVI
HNATDVAPKN EFVMRPATVR VTVLPPVDTS GWSVRTINNH VRDVRNMFLR TLGQPQESVA
ESVAREAAVE AKGEKTPKKA ATKRAAPKKK ATGKSAKA
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