Gene Sala_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0190 
Symbol 
ID4082299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp200525 
End bp202063 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content64% 
IMG OID638008549 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_615247 
Protein GI103485686 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTTA CGTATGCGCG TTGCATTCGG GGGGCGCATC CTCCACTTCT CTCACTGCTA 
TCCAAGGGGA CGAATGTGAG CGTCAAGGTC GAAACATTGG TGTTGTTCGG GGCAACGGGC
GACCTGGCGC AGCGTATGCT TTTCCCCTCG CTCTACAATC TGCACATGGA CGGACTGCTC
GCCGACGCGC TGACGATCGT CGGGTCGGGG CGCTCGGCGA TGGACCGCGA CGCCTTTCGG
GCGCAGGTCC GCGCCGCGCT GACCGAGTAT CTGCCCGAAG ACCGCATCGA GGCGGCGGTC
GTCGACGGCT TCCTTGCGCG CATCGATTAT TGCGCGATCG ACGCTGGCGC TGGCACCGGC
TATGCGGAAC TCGCGGCTTT GCTCGGCGAC CGCATGGCGC GCCCGATTGG CGTTTACCTC
TCGACGCCGC CGTCGATGTT CGGACCGATC GCGCAGGGGC TTAAAGCTGC GAACATCGCG
TGCGCCGAAT GCCGTATCGC GATGGAAAAG CCGATCGGCC ACGACCTCGC CTCGTCGCGC
GAAGTCAATG CCCAGGTCGG CGACGCCTTT GCCGAGGACC GGGTGTTCCG CATCGACCAT
TATCTCGGCA AGGAAACGGT GCAGAATCTG CTCGCGCTGC GCTTTGCCAA CATGTTGTTC
GAACCGCTGT GGAACGCGCA GGCGATCGAC CATGTCCAGA TCACCGTTGC CGAAACCGTC
GGGCTGGAGG GCCGCGTTTC CTATTATGAC GGCGTCGGCG CGCTGAAGGA CATGGTGCAG
AATCACATGC TCCAACTGCT CGCAATCATC GCGATGGAGC CCCCGGCCAG CGTCGGGGCG
ACCGCAGTGC GCGACGAAAA GGTCAAGCTG TTGCGCTCCT TGCGCAAGAT GACCGCGGAG
GATGTAAAGG CGCACAGCGT CAAGGGCCAG TACAGCAGCG GCGCGGTTAA CGGCGCCGCG
GTCGCGGGCT ATGCCGACGA ACTCGGCCAG CCGTCGAACA CCGAAACCTT CGTCGCCTTG
AAGGCCTTTA TCGACAATTG GCGGTGGAAG GGCGTGCCCT TTTACCTGCG CACCGGCAAA
CGGATGCCGC AGCGCAAATC CGAAGTGCTG ATCCAGTTCA AGCCCGTGCC GCACAATATC
TTCGCGCGCG TCGGTGCGGG CAAGCTCGAC GCGAACATGA TGATCATCAA TTTGCAGCCC
GAGGAAAATA TCCGCGTCAA GGTGATGGCA AAGCAGCCGG GGCTCGACCG CGACGGGGTG
AAGCTCAAGG AAGTGACGAT GGACGTCTCG CTCTCGCACA GCTTCGCGGG CGAGCGCCGC
CGCATCGCCT ACGAGCGCCT GCTGCTCGAT TTCATCGAGG GCGACCAGAC CCTCTTCGTG
CGCCGCGACG AGGTCGAGGC GCAGTGGGAG TGGATCGACG CGATCCGCGA TGCCTGGGAT
CAGGTCGACA TGACACCGCA AAGCTACACC GCTGGAAGCT GGGGGCCGAG TTCGGCGATC
GCGCTGATCG AGCGCGACGG GGCGAGCTGG CATGATTGA
 
Protein sequence
MRLTYARCIR GAHPPLLSLL SKGTNVSVKV ETLVLFGATG DLAQRMLFPS LYNLHMDGLL 
ADALTIVGSG RSAMDRDAFR AQVRAALTEY LPEDRIEAAV VDGFLARIDY CAIDAGAGTG
YAELAALLGD RMARPIGVYL STPPSMFGPI AQGLKAANIA CAECRIAMEK PIGHDLASSR
EVNAQVGDAF AEDRVFRIDH YLGKETVQNL LALRFANMLF EPLWNAQAID HVQITVAETV
GLEGRVSYYD GVGALKDMVQ NHMLQLLAII AMEPPASVGA TAVRDEKVKL LRSLRKMTAE
DVKAHSVKGQ YSSGAVNGAA VAGYADELGQ PSNTETFVAL KAFIDNWRWK GVPFYLRTGK
RMPQRKSEVL IQFKPVPHNI FARVGAGKLD ANMMIINLQP EENIRVKVMA KQPGLDRDGV
KLKEVTMDVS LSHSFAGERR RIAYERLLLD FIEGDQTLFV RRDEVEAQWE WIDAIRDAWD
QVDMTPQSYT AGSWGPSSAI ALIERDGASW HD