Gene Sala_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0152 
Symbol 
ID4081822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp146835 
End bp147116 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content60% 
IMG OID638008511 
ProductXRE family transcriptional regulator 
Protein accessionYP_615209 
Protein GI103485648 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCT GTAAAGAGTG TTTGACAGAC GAAACAGCCA ACTGTAAAGA GCTCTTGACA 
GGCACGGGAG CAGCTGTGGA AAATCGGGTG CGCGAATATC GCGAGGCGGC GGGATGGAGC
CAGGGCGAGC TGGCGCGGCG GCTCGGCGTG TCGCGTCAGA CGATCAACGC CGTCGAAACC
GACAAATATG ACCCCAGCCT GCCGCTGGCG CTGCGCATGG CGCGCCTCTT CGCGCTCGAA
GTGTGCGAAC TGTTCATCGA TCACTGGAAC CCGAAGGAGT AG
 
Protein sequence
METCKECLTD ETANCKELLT GTGAAVENRV REYREAAGWS QGELARRLGV SRQTINAVET 
DKYDPSLPLA LRMARLFALE VCELFIDHWN PKE