| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0147 |
|---|
| Symbol | |
|---|
| ID | 4081817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 142661 |
|---|
| End bp | 143389 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638008506 |
|---|
| Product | rhodanese-like protein |
|---|
| Protein accession | YP_615204 |
|---|
| Protein GI | 103485643 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1054] Predicted sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.744417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCA CCGTCGCCGC CCTCTATCGC TTCGCCGCTT TCGACGACCC GGCGGCGCTG
CGCCAGCCGC TGCTGAACCA TTGCGCGATC GAGGGCGTCA AAGGCACGCT GCTGCTCGCG
CGCGAAGGGA TCAACGGCAC GATCGCCGGA ACCGATGTCG GCATCGCCGC AGTGATCGAC
CATATCCGCG CACTCCCCGG CTGCGCGGCG CTCGACGTCA AATACTCGGT CGCCTCCGCC
ATGCCCTTCA GGCGGCTCAA GGTGCGGCTG AAGAAGGAAA TCGTCACGAT GAGGGTGCCG
GGCCTCGACC CCGCGCGCAA CGCCGCACCC TATGTCGACC CCGCCGACTG GAACGCACTC
GTCGACGATC CGGGCACGGT GCTCATCGAC ACGCGCAACG GTTTCGAGGT CGGCTATGGC
AGCTTCGCGG GCGCGGTCGA TCCCGGCACA AAGAGCTTCG GCGACTTTCC GGGCTGGTGG
CGCGCCAATG CCGATCGCTT CACGGGCAAG CGCATCGCTA TGTTCTGCAC CGGCGGCATC
CGCTGCGAAA AATCGACCGC CTTCCTGCGC CACGAAGGCG TCGAGGACGT CGTCCACCTG
AAAGGCGGCA TCCTCGCCTA TCTCGAACAG GTGCCCGCGT CCCAAAGCCG CTGGCACGGC
AGCTGTTTCG TCTTCGACGA ACGGGTCAGC GTCGGGCATG GATTGGTCGA GATGGGCGAG
AAGGAATAG
|
|---|
| Protein sequence | MTVTVAALYR FAAFDDPAAL RQPLLNHCAI EGVKGTLLLA REGINGTIAG TDVGIAAVID
HIRALPGCAA LDVKYSVASA MPFRRLKVRL KKEIVTMRVP GLDPARNAAP YVDPADWNAL
VDDPGTVLID TRNGFEVGYG SFAGAVDPGT KSFGDFPGWW RANADRFTGK RIAMFCTGGI
RCEKSTAFLR HEGVEDVVHL KGGILAYLEQ VPASQSRWHG SCFVFDERVS VGHGLVEMGE
KE
|
|---|
| |