| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0146 |
|---|
| Symbol | |
|---|
| ID | 4081816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 141909 |
|---|
| End bp | 142535 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638008505 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_615203 |
|---|
| Protein GI | 103485642 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.844636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCT GGTGGGAGCG GCACGGCGTC CCGCGCCTGA TCAAATGCGC CTGTTCGCAG
GGGCAGATCA TGAAGCTGAG GAGCCGGATC GTGCCGTATG CGCGCGGCCA TGTGCTCGAA
CTCGGCTGCG GCGGCGGGAT CAACATGGCA TTTTACCGTC CGGAACAGGT CGAGAGTTTC
TCCGGGATCG ACCCGTCGCC CGAACTGCTG GCGATGAGCC GCGCGGCGGC GGCCGGGCGC
GGGATGGCGG CCGACATTCG GGGCGGCGTC GGCGAAGCGA TGCCGTTCGA CAGCGGGCAG
TTCGATACCG TCGTCACTAC CTTCACCCTC TGTTCGGTCG CCGATCAGGC CGCGGTGCTC
GCCGAAATCC GCCGCGTGCT GAAACCGGGC GGGACCGCGC TATTCCTCGA ACATGGCGGC
GCGCCCGATG CCGGGGTCGC GAAATGGCAG CGGCGTATCG AGCCGGTCTG GAAACGCATC
GGCGGCAATT GCCACCTGAC GCGCCCGATC GGCGACGCCT ATGCCGCGGC AGGCTTTGCG
GTCGAGCGAC AGGGCGCCGC CTATATGCCG AAAACGCCGC GCCCGTTTGG CTGGGTCGAA
TATGGCGCGG CGCGGGTCGC GGGGTAG
|
|---|
| Protein sequence | MASWWERHGV PRLIKCACSQ GQIMKLRSRI VPYARGHVLE LGCGGGINMA FYRPEQVESF
SGIDPSPELL AMSRAAAAGR GMAADIRGGV GEAMPFDSGQ FDTVVTTFTL CSVADQAAVL
AEIRRVLKPG GTALFLEHGG APDAGVAKWQ RRIEPVWKRI GGNCHLTRPI GDAYAAAGFA
VERQGAAYMP KTPRPFGWVE YGAARVAG
|
|---|
| |