Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0126 |
Symbol | |
ID | 4082274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 122439 |
End bp | 122954 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638008485 |
Product | methionine sulfoxide reductase A |
Protein accession | YP_615183 |
Protein GI | 103485622 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.140688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC GTTCCATCCT TGCCGGCGGC TGCTTCTGGG GCATGCAGGA CCTGATCCGC AAACTCCCCG GCGTCGTCAG CACCCGTGTC GGTTACAGCG GCGGCGATGT GCCGAACGCG ACCTATCGCA ACCACGGCAC GCACGCCGAG GCGATCGAGA TCAATTTCGA TCCCGATCAG ATCAGCTACC GCCGGATCCT CGAATTTTTC TTCCAGATCC ACGATCCGAC CACGCGCAAT CGCCAGGGCA ACGACCGCGG CGGGAGCTAT CGCTCGGCGA TCTATTATGC CGACGAAGCG CAGCGTGAAA CCGCGTTGCA GACGATCGCG GACGTCAACG CATCCGGCCT CTGGCCGGGA AAGGTAGCGA GCGAGTTGGA GCCGATTGGC CCCTTCTGGG AGGCGGAGCC GGAGCACCAG GATTATCTGG AGCGCCGTCC CAATGGTTAC ACCTGCCACT TTCCGCGCGC CGCCTGGGTC CTTCCATCGG CCGGCGAGCG GTCTGAGGCA GCTTGA
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Protein sequence | MTERSILAGG CFWGMQDLIR KLPGVVSTRV GYSGGDVPNA TYRNHGTHAE AIEINFDPDQ ISYRRILEFF FQIHDPTTRN RQGNDRGGSY RSAIYYADEA QRETALQTIA DVNASGLWPG KVASELEPIG PFWEAEPEHQ DYLERRPNGY TCHFPRAAWV LPSAGERSEA A
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