Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0058 |
Symbol | |
ID | 4081552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 63977 |
End bp | 64852 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638008419 |
Product | hypothetical protein |
Protein accession | YP_615117 |
Protein GI | 103485556 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.20737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGC CTGCTCCAAC GCGATTTCTG CTGTACATCG ACATTCTCGG TTTTTCCGAA ATGACGAAGA GCGATCCTCG TTCGGTCGCT CGCACCTATG CGATCTTGAA CAAGCTTAAT GTACATCGGG ACAAGGCATT CAAGACGATC GTGTTTTCGG ACACGGTGCT GGTCTACAAC CCCATCGGGG CGCGCAACGA CGAAGACCGC AATTTCTATG TCTGGTATTT GGCAGAGGCG GCTGAAGACC TTTACAGCCG TTTGGTGGGG CAGGACATAT GGTTCCGGGC TGTCCTGATC GCCGGAGAGT TCAATCACTA TCAGCTTGAG AATCTGGACG CCTTCTATGG AAAGGCCCTT ATCGACGCTT ACCAATCGGA GAAGCGGCTA CCCTTGATTG GCCTTGCGCT CCATTCCTCG TGCCTGCCCT ACAATCGGTT TTTTAGGGTT TCGCCCTTCA CCGACGACTT CTCGTTCGTC TATTTGAGTC GTCCCTTAGA ATATCTGCAC GCGGCATCCG GTGACGGCTA TCCCTTCGCC AATCGGATAG TCAGTGATCA TTCCCCAGCT CTCCCGGAAG GCGTGCGTTA CCTCTCCGAT ATCTACCGCC TAATGCGGAC GCATCCAGAA CCGTTAGTTC GGGCGAAAGC GCTCACGACA TGGGATTTCC ATGCTCGCCG ATATCCGGGA ATGGTTGCGG CTCTCGTCGC CAACAACTTT AGTTTGGATG CTTTGGCCCC ACCGGGAACA TGGGATATTG CGGTGAAAAC CCTCGAAGAG AATATCCGGC ACAACAAGCG GGCCGGTGCA GGTTCGCAGA TGTCTGTGAG TATCACTCCG CAGCGGCCTA GGAAGCCAGG CAAGGCGATT TTCTAA
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Protein sequence | MTEPAPTRFL LYIDILGFSE MTKSDPRSVA RTYAILNKLN VHRDKAFKTI VFSDTVLVYN PIGARNDEDR NFYVWYLAEA AEDLYSRLVG QDIWFRAVLI AGEFNHYQLE NLDAFYGKAL IDAYQSEKRL PLIGLALHSS CLPYNRFFRV SPFTDDFSFV YLSRPLEYLH AASGDGYPFA NRIVSDHSPA LPEGVRYLSD IYRLMRTHPE PLVRAKALTT WDFHARRYPG MVAALVANNF SLDALAPPGT WDIAVKTLEE NIRHNKRAGA GSQMSVSITP QRPRKPGKAI F
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