| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0047 |
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| Symbol | |
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| ID | 4081540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 47553 |
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| End bp | 48638 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008407 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_615106 |
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| Protein GI | 103485545 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.311118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTC CCGCCTTCGC CCGTCTGCCC CATCCCAGTC CCGTGGCCGA TGACGTACGC
GCGGCGGCGA TCGCCGATCC CGCGTTCGGG CGGGTGTTCA CCGACCATAT GGTGTCGATT
CGCTATACCG AAGGGCAGGG CTGGCACGAC GCACAAGTCA TGCCGCGCGG GCCGCTGACG
CTCGATCCGG CGACCGCGGT GCTGCATTAT GCACAGGAAA TCTTCGAAGG GTTGAAGGCT
TACCGGCTCG ACGATGGCTC GATGGCGCTG TTCCGCGTCG AGGCCAATGC CGCGCGCTTC
AACGCCAGCG CGCGCCGCAT GGCGATGGCC GAGCTGCCCG AGGAGTTGTT CATTGCCGCG
GTAAAGGAAG CCGTCGCCGC CGACGCGCAC TGGTTCCCGC CGGTCGATGG CGGCGCGCTT
TATCTGCGCC CTTTCATGTT TGCGAGCGAG GTGTTCCTGG GCGTCAAGCC CGCGTCCGAA
TATCAGTTCC TCGTCATCAC CTCGCCCGTC GGCAATTATT TCAAGTCGAG CGCCCCCGCG
ATCTCGCTCT GGGTGTCGGA GGATTATACC CGCGCCGCGC CGGGCGGGAC GGGGGCGGCG
AAATGCGGCG GCAATTATGC CGCGAGCCTG ATCGCGCAGC GCGAAGCCAT CGCCAAGGGT
CACGATCAGG TCGTTTTCCT CGACGCCGCC GAGCATCGCT GGATCGAGGA ACTGGGCGGC
ATGAACATGT TCTTCGTCTT TGATGACGGC AGCCTCGTCA CCCCGCCGCT CACCGGCACG
ATCCTGCCCG GCATCACCCG CGACGCGATC ATCACGCTCG CGCATGACGC GGGCCTCACG
GTGCGCGAGG AAGCCTATGC GATCGACCAG TGGCAGGCCG ATGCGGAGAG CGGCAGACTA
ACCGAAAGCT TTGCCTGCGG CACCGCGGCA GTGGTTACGC CGGTCGGCAA GGTGACGCGC
GGGGAGAAGA GCTTCACCAT CGGCGCGGGT GGTCAAGGCC AGGTCACCGA AATGCTGAAA
GCGAGGCTCG TCGATATCCA GCGCGGCCGC GCCGCCGACC CCCATGGCTG GGTGACGCGG
ATCTGA
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| Protein sequence | MSAPAFARLP HPSPVADDVR AAAIADPAFG RVFTDHMVSI RYTEGQGWHD AQVMPRGPLT
LDPATAVLHY AQEIFEGLKA YRLDDGSMAL FRVEANAARF NASARRMAMA ELPEELFIAA
VKEAVAADAH WFPPVDGGAL YLRPFMFASE VFLGVKPASE YQFLVITSPV GNYFKSSAPA
ISLWVSEDYT RAAPGGTGAA KCGGNYAASL IAQREAIAKG HDQVVFLDAA EHRWIEELGG
MNMFFVFDDG SLVTPPLTGT ILPGITRDAI ITLAHDAGLT VREEAYAIDQ WQADAESGRL
TESFACGTAA VVTPVGKVTR GEKSFTIGAG GQGQVTEMLK ARLVDIQRGR AADPHGWVTR
I
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