| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0044 |
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| Symbol | |
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| ID | 4081537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 44414 |
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| End bp | 46099 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638008404 |
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| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
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| Protein accession | YP_615103 |
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| Protein GI | 103485542 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.360147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACGC CGCCCGTGAA GCTCAAATAT CCGATCGCCG CCCTTGTGGG TGCGCTTTGC
CTTGCCGGTG CCGGAACCAC GGTCGCGCAG GAGGCGGCGC CCGCCGCGCG CCGCGCGACC
GCCGCGATCC AGGCCCCCAA ACTGCTCGTC GTGATCGCGG TCGACCAGCT GTCGGCCGAT
CTCTTCGCCG AATATCGTGG CCGCTTCCGC GGCGGTCTTG CGCGGCTCGC AACGGGGGTC
GTCTTTCCCT CGGCCTATCA GGCGCACGGC GCGACCGAGA CTTGCCCCGG CCATTCGACG
ATCCTGACCG GCAGCCACCC CGCGCGCACC GGCGTCGTCG CGAACAATTA TTTCGACCTG
TCGGTCGCGC GCGCCGACAA GCGCGTCTAT TGCGCCGAGG ACGAAACGGT GCCGGACACC
AGTTCGGGCA GCGGCAAATA TGCGCCGTCG GTCAAGCATC TGCTCGTCCC GACGCTCGGC
GATCTGATGA AGGCGCGCGA TCCGCAGGCG CAGGTCGTGT CGGTCGCGGG CAAGGACCGC
GCCGCGATCA TGATGGGCGG GCACCGCGCC GACGAGACGC TGTGGCTCGC GCCCACCGGC
CTCACCAGCT ATCGCGGTAA GGCGCTGTCG CCGACTGCCG AGCGCGCGGC TACGGTGATC
GCCGCGGCGA TCAACCAGCC GCGCGGGCCG CTGACGCTGC CCGCCGAATG TGCGGCGCAG
GATATTGCGA TCCCGCTCGC GAACGGCGCG TCGGTCGGCA CCGGGCGAAT GGCGCGCGAT
GCGGGCGATT TCCGCCGCTT CCTGGCCTCA CCCGAAGCCG ATGGCGCGGT GCTTGCGACC
GCCGCCGCGC TGCGTCAGGC GCGCCGGATG GGCCAAGGCA GCGGCACCGA CCTGCTGATC
ATCGGCCTGT CGGCGACCGA TTATGTCGGG CACGGCACGG GGACCGAGGG CAGCGAAATG
TGCCTGCAAC TCGCTGGCCT CGACCGCGAG CTTGGCGATT TTCTTGCGCG GCTCGATGCG
ACCGGGATGA ACTATGCCGT CGTGCTGACC GCCGATCATG GCGGGCACGA CCTCCCCGAA
CGCAACCGCC AGAATGCGTG GCCCGACGCG CAGCGCATCG ACACGGCGCT GGACCCCGAG
GCGCTGGGCA ATGAGGTAGC CGAAAAGCTG GGCCTGCCGC AGCCTTTGCT CCATGGCGAG
GGCGGCGACT ATTATCTCTC GAAGGCCCTG ACCGCTGCGC AGCGCAAAGC CGCGCTTGCC
GAGATATTGC CGCGCCTGCG CGCGCATCCG CAGGTCGAAA TGGTCGCGAC CCGCGACGAA
CTGGCGGCGC ATCCCATCTC CAGACGCGCG CCCGATATGT GGAGCGTGAT GGACCGGCTG
CGCGCTTCCT TTCACCCCGA CCGGTCGGGC GATTTCATCG TCGCGCTCAA GCCCCGCGTC
ACCCCGATCG CCGAACCGGG CGTGGGCTAT GTCGCGACGC ACGGATCGGT GTGGGATTAT
GACCGCCGCG TGCCGATGAT CTTCTGGCGC AAGGACCTTG CCGGGTTCGA GCAGCCCAAT
GCCGTGATGA CGGTCGACAT CATGCCGACG CTCGCGGCAC TGATCGGCCT GCCGGTCGAT
GCGGGCGCCA TCGATGGCCG CTGCCTCGAC CTGGTTTCGG GTCCGGACAG CAGTTGCCAA
CAATAA
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| Protein sequence | METPPVKLKY PIAALVGALC LAGAGTTVAQ EAAPAARRAT AAIQAPKLLV VIAVDQLSAD
LFAEYRGRFR GGLARLATGV VFPSAYQAHG ATETCPGHST ILTGSHPART GVVANNYFDL
SVARADKRVY CAEDETVPDT SSGSGKYAPS VKHLLVPTLG DLMKARDPQA QVVSVAGKDR
AAIMMGGHRA DETLWLAPTG LTSYRGKALS PTAERAATVI AAAINQPRGP LTLPAECAAQ
DIAIPLANGA SVGTGRMARD AGDFRRFLAS PEADGAVLAT AAALRQARRM GQGSGTDLLI
IGLSATDYVG HGTGTEGSEM CLQLAGLDRE LGDFLARLDA TGMNYAVVLT ADHGGHDLPE
RNRQNAWPDA QRIDTALDPE ALGNEVAEKL GLPQPLLHGE GGDYYLSKAL TAAQRKAALA
EILPRLRAHP QVEMVATRDE LAAHPISRRA PDMWSVMDRL RASFHPDRSG DFIVALKPRV
TPIAEPGVGY VATHGSVWDY DRRVPMIFWR KDLAGFEQPN AVMTVDIMPT LAALIGLPVD
AGAIDGRCLD LVSGPDSSCQ Q
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