Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0037 |
Symbol | |
ID | 4082224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 36101 |
End bp | 38722 |
Gene Length | 2622 bp |
Protein Length | 873 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638008397 |
Product | 5-methyltetrahydrofolate--homocysteine methyltransferase |
Protein accession | YP_615096 |
Protein GI | 103485535 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0357424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.645269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAA CCCTTTCCTC CTCCACCTTC GTCAACATCG GTGAACGCAC CAACGTCACC GGTTCAGCGG CGTTCAAGAG GCTGATCCTC GCCGACGACT ATGCCGCGGC GGTCGAGGTC GCGCGCCAGC AGGTCGAAAA TGGCGCGCAG ATCATCGACG TCAATATGGA CGAAGGCCTA CTCGACGCCG AACATGCGAT GACGACCTTC CTCAAGCTCA TCGCCGCCGA GCCCGACATT GCGCGCGTGC CGGTGATGAT CGACAGTTCG AAATGGAGCG TGATCGAGGC CGGGCTGAAG TGCGTTCCCG GCAAGCCGAT CGTCAATTCG ATCAGCATGA AGGAAGGCGA GGAGCAATTC CTGGACCATG CGAAGAAGTG CATGGCCTAT GGCGCCGCGG TCGTCGTCAT GGCGTTCGAC GAGGTCGGAC AGGCCGACAC CAGGGAGCGC AAGGTCGAGA TTTGCGAGCG TGCCTACAAG CTGCTGATGA CCATCGGCTT TCCGCCCGAG GACATTATCT TTGATCCCAA TATCTTCGCG GTCGCGACGG GGATCGAGGA GCATGACAAT TATGCGGTCG ATTTCATCGA GGCGGTGAAG GAGATCCGCG TCCGCTGTCC GCACGCGCAT TTTTCGGGGG GGCTGTCGAA CCTGTCGTTC AGCTTTCGCG GCAACGAGAC CGTGCGCCGC GCGATGCACA GCGTCTTTCT CTACCATGCA ATTCCCGCGG GACTCGACAT GGCGATCGTC AACGCCGGGC AGCTCGACGT CTATGACACG ATCGACCCCG AACTCAGGAC CGCGTGCGAG GATGTCATCC TCAACCGCAA GGTCGAAGGC GAAGAGCTCA GCCCTACCGA ACGGCTGATT GCGCTCGCCG AACGCTATAA GGGAACGAAC GCCGCGCAGG AAAAGGCGGC TGAGGAATGG CGCGGCTGGG CGGTCGAAAA GCGCCTTGAA CATGCGCTGG TCAAGGGCAT CGACGCGCAT ATCGTCGAAG ATACCGAAGA AATGCGCCGC GCCATGGATC GTCCGATCGA GGTGATCGAA GGGCCGCTGA TGGACGGGAT GAACGTCGTC GGCGACCTGT TCGGGTCGGG CAAAATGTTC CTGCCGCAGG TCGTCAAATC GGCGCGCGTG ATGAAAAAGG CGGTCGCGCA CCTGCTGCCT TTCATCGAGG CGTCGAAGGA GCCGGGAGCA AAGGGCAAGG GCAAGATCGT GATGGCGACC GTCAAGGGCG ACGTCCACGA CATCGGCAAG AATATCGTCG GCGTCGTGCT GCAGTGCAAC GGTTTCGAAA TCATCGACCT GGGCGTGATG GTGCCGTGGA GCAAGATCCT GGAGGCCGCG AACGAGAATG ACGCCGACAT GATCGGTCTG TCGGGCCTCA TCACCCCCTC ACTCGACGAG ATGGTGACGG TGGCCGAGGA AATGCAGCGC GCGGGCATGA CGATTCCGCT CCTCATCGGC GGCGCGACGA CGTCGAAGGT CCATACCGCG CTGCGCATCG ACCCGGCCTA TCAGGGGCCG GTGCTCCACG TTCTCGACGC CAGCCGCGCG GTCGGCGTCG CGACCGCGCT GGTCAGCGAC ACCGGGCGCG ATGCCTATGT GAAGGGGTAT AAGAATGATT ACGCCCATGT CCGCGACGTG CGCGCGGGCA AGGGGCAAAG CGTGCTGCTG AGCATCGAGG AGGCGCGCGC CAATTATTAC GATGCCTATT TGAGCGACAA GCCCGCACCG CCGCTCCAGC CCGGCCTCCA CCGCTTCGAC GACTGGTCGC TCGCGGACCT GCGCGACTAT ATCGACTGGA CGCCCTTCTT TCGCGCATGG GAACTGCATG GAACCTGGCC GTCGATCCTG CAAGACGAGG TGGTCGGGGA GACGGCGCGG GCGCTCAAGG CCGATGCCGA TGCGATGCTC GACCAGATTA TTGCGGAGCA ATGGCTGACG GCGCGTGGGG TTTGCGCCTT CTGGCCGTGT GCGCGGCACG GTGACGATAT TGTCATCCAC CTTGCCGAGG AAGAGCGCCA TGTGACGCTC CCGTTCCTGC GCCAGCAAAT CAAGAAGAGC CGCGACCGCG CCAATATGTG TCTCGCCGAC TTCATCGACC CGGCGGGTGA CTGGATCGGC GGCTTTGCGG TCGGCATCCA TGGGATCGAG CCGCATTCGG AGCGCTTCCG CGCCGACAAG GATGATTATT CGGACATTTT GCTCAAAGCG CTCGCCGACC GCTTCGCCGA AGCCTTTGCC GAGCGGCTGC ACCAGCATGT CCGCACCACA TTATGGGGCT ATGCGCCGGG CGAACAGCTC ACCAACGAAG CGCTGATCAA GGAGGAATAT CGCGGCATCC GCCCGGCGCC CGGTTACCCG GCGTGCCCCG ACCACAGCCT GAAACCGATC CTGTTCGATC TGCTTGGCGC GGGAGAGAAT GCCGGGCTGG TGCTGACCGA AAGTTTTGCG ATGCTGCCGA CCGCGGCGGT GAGCGGCTTT TATTTCGGCC ATCCCGAAAG CCAGTATTTC GGCGTAGCGC GGATCGGCAG TGACCAGCTG GAGGATTATG CCCGGCGACG CGGCGTCGAT CTGGAAACCG CGACGCGCTG GCTGCGGCCC AATCTGGATT GA
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Protein sequence | MTETLSSSTF VNIGERTNVT GSAAFKRLIL ADDYAAAVEV ARQQVENGAQ IIDVNMDEGL LDAEHAMTTF LKLIAAEPDI ARVPVMIDSS KWSVIEAGLK CVPGKPIVNS ISMKEGEEQF LDHAKKCMAY GAAVVVMAFD EVGQADTRER KVEICERAYK LLMTIGFPPE DIIFDPNIFA VATGIEEHDN YAVDFIEAVK EIRVRCPHAH FSGGLSNLSF SFRGNETVRR AMHSVFLYHA IPAGLDMAIV NAGQLDVYDT IDPELRTACE DVILNRKVEG EELSPTERLI ALAERYKGTN AAQEKAAEEW RGWAVEKRLE HALVKGIDAH IVEDTEEMRR AMDRPIEVIE GPLMDGMNVV GDLFGSGKMF LPQVVKSARV MKKAVAHLLP FIEASKEPGA KGKGKIVMAT VKGDVHDIGK NIVGVVLQCN GFEIIDLGVM VPWSKILEAA NENDADMIGL SGLITPSLDE MVTVAEEMQR AGMTIPLLIG GATTSKVHTA LRIDPAYQGP VLHVLDASRA VGVATALVSD TGRDAYVKGY KNDYAHVRDV RAGKGQSVLL SIEEARANYY DAYLSDKPAP PLQPGLHRFD DWSLADLRDY IDWTPFFRAW ELHGTWPSIL QDEVVGETAR ALKADADAML DQIIAEQWLT ARGVCAFWPC ARHGDDIVIH LAEEERHVTL PFLRQQIKKS RDRANMCLAD FIDPAGDWIG GFAVGIHGIE PHSERFRADK DDYSDILLKA LADRFAEAFA ERLHQHVRTT LWGYAPGEQL TNEALIKEEY RGIRPAPGYP ACPDHSLKPI LFDLLGAGEN AGLVLTESFA MLPTAAVSGF YFGHPESQYF GVARIGSDQL EDYARRRGVD LETATRWLRP NLD
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