Gene Sala_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0021 
Symbol 
ID4083152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp15206 
End bp16714 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content71% 
IMG OID638008381 
ProductMg chelatase-related protein 
Protein accessionYP_615080 
Protein GI103485519 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.253404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0270376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCAA TCGTCTCAAC CGCCGCCTAT CTCGGCATCG AGGCCCGCGG GGTCGAGGTG 
CAGTGCCAGA TCACGCCAGG CGTTCCGCGC TTCGTCCTCG TCGGCCTGCC CGACAAGGCG
GTCGGCGAAA GCCGCGAGCG CGTCCGCGCC GCGATCGCCG CGATCGGCCT GTCGCTCCCG
CCCAAGGTCA TCACCGTCAA CCTCTCGCCC GCCGACCTGC CCAAGGAAGG CTCGCACTAT
GACCTGCCGA TCGCGCTCGC GCTTCTGGGC GCGATGGGGG TGATCGATGC CGAAACGCTG
GCGTCGTACG TCGTCGTCGG CGAACTCGGC CTCGACGGGC GCGTTGCCGC CTCGCCCGGC
GTGCTGCTCG CTGCGCTCCA CGCGGGCAGC GTCGAGCGCG GCCTCATCTG CCCCGCGGCG
CAGGGCCCCG AAGCGGCGTG GGCGGGCAAT GTCGAGGTGA TCGGCGCGCC CGACCTCCTG
TCGCTGCTCA ACCATTTCAA AGGCAATGCC CTGCTTCCGC CGCCAGTGCC GGGCGAAGTC
GCGGCGCCGG CGCGCGGCGC CGATCTCGCG CAGGTGAAGG GGCAGGAAAC CGCCAAGCGC
GCGCTCGAAA TCGCCGCGGC GGGCGGACAC AACCTTTTGA TGTCGGGCCC GCCGGGCGCG
GGCAAGTCGC TGATGGCCGC CTGCATGCCC GGCATATTGC CCGAGCTGAC CCCCGCCGAG
GCGCTGGAGG TGTCGATGAT CGCCTCGGTC GCCGGACAGC TCGACGGCGG GCGGCTGGTA
CGCGCGCGGC CGTTTCGCAG CCCTCACCAT TCGGCGTCGA TGCCCGCGCT CGTCGGCGGG
GGTCTGCGCG TGCGGCCGGG CGAGGTCAGT CTCGCGCATC TCGGCGTATT GTTCCTCGAC
GAGCTGCCCG AGTTTCAGCG CGGGGTGCTC GATTCGCTCC GCCAGCCGCT CGAAACGGGC
GAGGTCAGCG TAGCGCGCGC CAATGCGCAT GTCACCTTTC CCGCGCGCGT CCAGCTCGTC
GCGGCGATGA ACCCGTGCCG CTGCGGCCAT CTTGGCGACC CCGCGCTCGC GTGCAGCCGC
GCGCCGCGCT GCGCCGCCGA TTATCAGGCG AAATTGTCGG GGCCGCTGCT CGACCGCATC
GACCTGCACG TCGAGGTACA GGCGGTGAGC GCCGCCGACC TCACCCTGCC GCCCCCCGCC
GAAGGCAGCG CCGAAGTCGC CGCACGCGTC GCGGCGGCGC GCGATGTGCA GACCCGGCGC
TATGCGGAGC TCAGGGCGCG CACCAATGCC GAAATCGACG GCGAATTGCT CGAAGCGGTC
GCGATGCCTG ACGAAGCCGG GCGCAAGCTG CTCGCGCAAG CCGCCGAGGC GATGCGGCTG
TCGGCGCGCG GCTATACGCG AATCCTGCGC GTCGCGCGGA CGATCGCCGA CCTTGCGGGC
TCCGAAACCG TTGGTCGCAT CCATATCGCC GAGGCGCTGA GCTATCGCCG CCAGGCACCG
AGGAATTAG
 
Protein sequence
MVAIVSTAAY LGIEARGVEV QCQITPGVPR FVLVGLPDKA VGESRERVRA AIAAIGLSLP 
PKVITVNLSP ADLPKEGSHY DLPIALALLG AMGVIDAETL ASYVVVGELG LDGRVAASPG
VLLAALHAGS VERGLICPAA QGPEAAWAGN VEVIGAPDLL SLLNHFKGNA LLPPPVPGEV
AAPARGADLA QVKGQETAKR ALEIAAAGGH NLLMSGPPGA GKSLMAACMP GILPELTPAE
ALEVSMIASV AGQLDGGRLV RARPFRSPHH SASMPALVGG GLRVRPGEVS LAHLGVLFLD
ELPEFQRGVL DSLRQPLETG EVSVARANAH VTFPARVQLV AAMNPCRCGH LGDPALACSR
APRCAADYQA KLSGPLLDRI DLHVEVQAVS AADLTLPPPA EGSAEVAARV AAARDVQTRR
YAELRARTNA EIDGELLEAV AMPDEAGRKL LAQAAEAMRL SARGYTRILR VARTIADLAG
SETVGRIHIA EALSYRRQAP RN