Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0009 |
Symbol | |
ID | 4083140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 7591 |
End bp | 8253 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638008369 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_615068 |
Protein GI | 103485507 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.607663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0509198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGA TCTTCTATGG CCACCCCTTC TCTTCATACA CGTGGAAGGC ACTGATCGCG CTGTACGAAA AGGGTATCGA TTTCGACTAT CGCGCACTCG AAACCGAAGC CCCCTTCACT CATTATGACG AACTGCGGGC CCATTGGCCG GTGGGACAGT TTCCCCTGAT CGTCCATGAC GGGCAGGCGC TGTTCGAATC GAGCATCATC ATCGAGTATC TCGACCAGAT TGTCCCCGAA CCGTGCATGG TTGCCGCCGA TCCGAAGGTG GCGCTCGACG TGCGGTTTCT GGACCGGATA TTCGACAATC ATTTTCAGGC GCGTTTTCAG GCCGTGGTCG CCGAATATCT GCCGTTCATC ACGGCAACGC CCGATCTTGC CCGCGTCGAG CGCGCGCGCG ATCTGCTCGA AAAAGCCTAT GGCTGGCTCG AGACCAGGCT GCCCAACGAC GGCTGGGCCA CGCCGCACGG CTTTTCGTTG GCCGACTGCG CCGCGGCGCC CGCGCTTTTC TATGCCGACT GGGTTCACCC GATCGATCCG CGCCATGTCA GGGTGCGTGC GTATCGTGCG CGTCTGAACG CACGGCCCAG CGTCGCGCGT TGTATCGAGG AAGCACGTCC CTATCGCGCT TTCTTCCCGC TTGGCGCGCC CGACCGCGAT TAA
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Protein sequence | MTLIFYGHPF SSYTWKALIA LYEKGIDFDY RALETEAPFT HYDELRAHWP VGQFPLIVHD GQALFESSII IEYLDQIVPE PCMVAADPKV ALDVRFLDRI FDNHFQARFQ AVVAEYLPFI TATPDLARVE RARDLLEKAY GWLETRLPND GWATPHGFSL ADCAAAPALF YADWVHPIDP RHVRVRAYRA RLNARPSVAR CIEEARPYRA FFPLGAPDRD
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