| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1728 |
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| Symbol | |
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| ID | 6331493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1788710 |
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| End bp | 1789273 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642658002 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001931879 |
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| Protein GI | 188997628 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000000299787 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGTAG AACATGTCGG AAAAAACATT GAAATTACTG ATTTTATCAA AGCTTATACA
GAACATAAGC TTGAAAGATT AAAACATTAC TTAAAAGATT TAGACGTAGC ACCAGACTCT
GTAAGGGTAA GAGTAGTTTA TGATTTTGAA AAGCATAGAC ACAGAAACAG AGTAGATATA
GATGTTTATC TTAATACTCC AGGTGGTGGT GTAATCCATG CTTGGGAAGA AAGTAATGAC
CTTTATTCAG CTATTGATTT TGTAATTGAT GAAGTAGAAA GACAGCTTGT TAGATTAAAA
CAAAGAAGAA TTGAAGCATC AAGAAGAGAA TCAAGATTAG AAAAAATGAA AGAACATACT
GTTCAAGAAT CTTCAATAGA AAGAGCTTTA ATTGTTATTG AACCAATGCC TTCTGAAAAA
CCTTTGACTG TTGAAGATGC AAGGTTAATG TTAGAAGAGA CCGGAGCATT TTTCTTACCA
TTTATTAATT CTGAGACCGG AGAAGTTAAC GTAATTTACA GAAAAAAAGC GGGTAATTAT
GGCTTAATTA CTCCAAGAGC TTAA
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| Protein sequence | MQVEHVGKNI EITDFIKAYT EHKLERLKHY LKDLDVAPDS VRVRVVYDFE KHRHRNRVDI
DVYLNTPGGG VIHAWEESND LYSAIDFVID EVERQLVRLK QRRIEASRRE SRLEKMKEHT
VQESSIERAL IVIEPMPSEK PLTVEDARLM LEETGAFFLP FINSETGEVN VIYRKKAGNY
GLITPRA
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