| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1724 |
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| Symbol | |
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| ID | 6331471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1784349 |
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| End bp | 1785032 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642657998 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001931875 |
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| Protein GI | 188997624 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.297453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAAAGT TGGCTCTTGC TCTTGATGTA AATGATATCA ACCAAGCATT AGAAATCGTT
GATGAAATCC AAGATAAAAT TATTATTAAG ATAGGCTATA ACCTTTTTAT TAAAGGTGGA
ATTAATTTTG TAAAACAAAT TAAAGACAGA GGATTTGATA TATTTTTAGA TTTAAAGCTT
CATGATATAC CAAACACTGT TTATAACGGC GTAAAAGCTG TATCAGAAAT TGGCGTTAAT
TATCTAACAA TACATTCTCT TGGCGGTCAA GAGATGATTC AGCAAGCTGT AAAAGCAAAA
GAAGGAACAG ATTTAAAAAT CTTAGCTGTA ACTATTCTGA CAAGTCATGA TGAAAACTAT
CCAAAATTAC TTGGCTCTTC TTTATCAGTC CCAGATTTGG CTTATAGATT GGCAGATATG
GCAGTTAGCA ATGGTTCAGA TGGGATAGTT TGTTCAAGTC ATGAAGTAAA GTTTTTAAAA
GAACATATAC AAAAACCATT TATTGCAGTT GTTCCGGGTA TAAGACTTAC AAAAGAAAAA
ACAGATGACC AAACAAGAAT AGCAACGCCG GAAGAAGCTC TAAGAGATGG TGCAGATATA
ATAGTTGTCG GAAGACCTAT TTTAAAAGCA GAAGACAGGA ATAAAATTAT TAAAGAAATG
TTGAGTGTTA TAGAGGAATT GTGA
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| Protein sequence | MKKLALALDV NDINQALEIV DEIQDKIIIK IGYNLFIKGG INFVKQIKDR GFDIFLDLKL
HDIPNTVYNG VKAVSEIGVN YLTIHSLGGQ EMIQQAVKAK EGTDLKILAV TILTSHDENY
PKLLGSSLSV PDLAYRLADM AVSNGSDGIV CSSHEVKFLK EHIQKPFIAV VPGIRLTKEK
TDDQTRIATP EEALRDGADI IVVGRPILKA EDRNKIIKEM LSVIEEL
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