Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1715 |
Symbol | lpxC |
ID | 6331439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1776163 |
End bp | 1777056 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642657990 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_001931867 |
Protein GI | 188997616 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000475768 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTGTC AATTTCAAAG AACAATAAAA AAACCAATAA TCATTGAGGG AATAGGCTTA CACTCAGGAG ATAATGTTAA AATAAAACTT TTTCCTGCAA ATAAAAATGA AGGAATAAAC TTTATTAAAA ATAATGTAGT TATACCTGCA AAGATAGATT ATGCTCATAG CTTTGAATAT TCAACAACTT TATACAAAGA CGGCGTTTCA GTTAGGACAA TAGAGCATTT AATGGCAGCA CTTTATTTTA CCGGAATTGA TAATGTTTAT ATTGAGTTAA TAGGCGAGGA GTTGCCAATC CTTGATGGAA GCAGCAAAGG TTTTGTTGAA AGGATAAAAG AAGCCGGAAT TAAAACACTT AACGAAGAAA AATTGTATGC AGTTTTAGAA GAACCTGTAA AGGTTGAAAT AGAAGATAAA TTTATTATGG CAAAGCCATC AAATGAAATA AAAATTACAT ATCAAGCAAA CTATAATAAT GATATTATCG GAAATAAAAG CTTTACATAC ATACCTTATG AAAAAGAGTC TTATGAAGGT GTTTATACAG CAAGAACTTA TTGCTTTTTA GAAGAAGTAG AGTACTTAAA GAAGAACGGT CTTGCCAAAG GCGGGTCTCT TGAAAATGCT GTTGTTTTTC ATAACAATCA GGTAATAAAC GAAGAGGGTT TAAGATTTGA AGACGAGCCT GTAAGACATA AAGTATTGGA TTTAATCGGT GATTTGTATC TGCTTGGCTA TCCTTTGGTT GCAGAAGTTT ACTCTTTTAA AGGCGGACAC AGATTAAATG CTATGTTTGT AAAAACATTG GTAGAAAACT CACTTTTTAC AATTAAACCA GCATCAGAAG TTTTAAATTT TATTCCAAAT TATAAAGAGG CTTTGGTAGG TTAA
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Protein sequence | MICQFQRTIK KPIIIEGIGL HSGDNVKIKL FPANKNEGIN FIKNNVVIPA KIDYAHSFEY STTLYKDGVS VRTIEHLMAA LYFTGIDNVY IELIGEELPI LDGSSKGFVE RIKEAGIKTL NEEKLYAVLE EPVKVEIEDK FIMAKPSNEI KITYQANYNN DIIGNKSFTY IPYEKESYEG VYTARTYCFL EEVEYLKKNG LAKGGSLENA VVFHNNQVIN EEGLRFEDEP VRHKVLDLIG DLYLLGYPLV AEVYSFKGGH RLNAMFVKTL VENSLFTIKP ASEVLNFIPN YKEALVG
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