| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1701 |
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| Symbol | |
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| ID | 6331934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1761186 |
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| End bp | 1762922 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642657976 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001931853 |
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| Protein GI | 188997602 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCA TCATAAGAAA AAAGAAAATA GATAAAAGTT TTACTGATTT AATAATAGAA
AGATTAGGTT TAAGCTTAGA AGAATTAAAA GAATATCAAG ATATTGCATC GTCTAAAAGA
AAAAATCTTT TGGAAATATT GGTTGAAAAT GGATATTCAG ATGAAGAAAT AGCTAAAATA
AAAGCAGAAT ATTTTGGCTA TACTTATGAC AGATTGACAA ATTATATACC TGAAGAGTAT
CTTCTAAATA TCTTCGATAA AAATTTCTTA AAAAATAGGC TTATTTTACC TATAAGTTTA
AAAGATAATG TTTTAATAGT TGCAATGGTT GAGCCATCAG ATATAATAAC ATTGAACGAA
ATGGTTGAAA TTCTAAAGAA AAATGGTTAT AGTGTTGGGG AGATATCGAT AATAGTCACA
ACAAAAAACC AACTATTGGA AAAAATAGAC TCTCTATTTG AAGAAAAAGC TAAATTATCA
AAAATTTTAC AAACGTTAGA AAAAACAACC GAGACAACAA TCTATAAAGA TTTTTCTAAC
GAATTAAAAG AAGTTACAGA AACCAGTTCA CCTATAATAG CTCTTGCAAA TCAAATTATT
GAAGATGCTT ATAAAAAGGG TGCAAGCGAT ATTCATATAC AACCAACGGA GAATAATTTA
AGGATTAGGT TTAGAATAGA CGGAGATTTA AATGATTATT TAGTTTTACC AAAATACACA
GCGGATGCAA TTATAGCTCG CTATAAAATT ATGGCAAATA TGAAATTAGA TGAAAAAAGA
TTGCCACAAG ATTCAAGGAT TAATTATAAC TATTATAATC CATCTATAAA CATAGATCTT
CGTGTTTCTA CCATTCCATC CGTTTATGGT GAAGACCTTG TAATGAGGAT TTTAGACAAA
TCTAATGTAA TTTTAGATTT AAATAAATTG GGATTTTCTG ATGAGTATCT AAGTTTATAC
AGAGATAGTA TTTTAAAACC CTATGGAATT ATTTTGCATG TGGGTCCTAC TGGTTCTGGA
AAAACGACTA CTCTTTACTC TGCATTAAAA GAGATAGATA AACCAGATAT TAAGGTTTTG
ACCGTTGAAG ATCCTGTTGA ATACCAACTT GGAGGTTCAA TTGTTCAAAC AAACATAAAT
CCAGCAGCAG GATATACTTT TGCAAAAGCA ATTCGTTCAT TTTTAAGACA CGATCCAGAT
GTTATACTTG TAGGTGAAAT TAGAGATTTA GAAACAGCAA AAACAGCTGT CGAAGCATCT
TTAACTGGTC ATCTTGTTTT TTCAACCTTA CATACAAACG ATTCTGTTAG CACGATAACT
CGCCTTGAGG AAATGGGTGT TGAAACTTAC TTACTTGCTG ATTCTTTATT ATTAATCTGT
GCTCAAAGAT TAGTAAAGAA AATATGTCCG CATTGTAAAG AAGAATATAA AGCAACAAAA
AAAGAGAAAA TTATATTAGA AAATGCTGGT ATGGAATTTG AAGAGAATTT AACTTTATAT
AAAGGTGCAG GATGTAGTGT TTGCAATTTT ACTGGGTATA AAGGAAGAAC TGGAATACAT
GAATTATTGA AAATCGATGA TGTATTAAAA TCAATGATTA TAGACAAAGC TTCTACGGAA
GATATGAAAA AATATGCACT TGGACATGGG ATGAAAACCT TGAGACAGGA TGGTTTATTA
AAAGCCTTAA AAGGAATTAC TACTATAGAG GAAGTTGTAA AAAGTACATT GGAATAA
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| Protein sequence | MEFIIRKKKI DKSFTDLIIE RLGLSLEELK EYQDIASSKR KNLLEILVEN GYSDEEIAKI
KAEYFGYTYD RLTNYIPEEY LLNIFDKNFL KNRLILPISL KDNVLIVAMV EPSDIITLNE
MVEILKKNGY SVGEISIIVT TKNQLLEKID SLFEEKAKLS KILQTLEKTT ETTIYKDFSN
ELKEVTETSS PIIALANQII EDAYKKGASD IHIQPTENNL RIRFRIDGDL NDYLVLPKYT
ADAIIARYKI MANMKLDEKR LPQDSRINYN YYNPSINIDL RVSTIPSVYG EDLVMRILDK
SNVILDLNKL GFSDEYLSLY RDSILKPYGI ILHVGPTGSG KTTTLYSALK EIDKPDIKVL
TVEDPVEYQL GGSIVQTNIN PAAGYTFAKA IRSFLRHDPD VILVGEIRDL ETAKTAVEAS
LTGHLVFSTL HTNDSVSTIT RLEEMGVETY LLADSLLLIC AQRLVKKICP HCKEEYKATK
KEKIILENAG MEFEENLTLY KGAGCSVCNF TGYKGRTGIH ELLKIDDVLK SMIIDKASTE
DMKKYALGHG MKTLRQDGLL KALKGITTIE EVVKSTLE
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