| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1601 |
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| Symbol | lysS |
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| ID | 6332572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1653690 |
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| End bp | 1655423 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657876 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001931753 |
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| Protein GI | 188997502 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000097302 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAG GGATTTTAGA AAGCAGATTA GAAAAAATTA GAAAATTAAC AGAAGAAGGA
AAAAATCCTT ACCCACATAA ATTTAGCATT ACAACAGACC TAAAATCTGT TAGAGAAGGA
CTTGAATTTG AGCCCGAAGA TAAAGAGTAC ATCATAAAAG GAAAAATAAA AAGGGTATCT
AAAAAGGAAA ACGATTATTT TATAAGATTT GAAGATTTAA ACGGACATTA CGAAATTCAA
GTAATCTTTC CACAAAAAGA AAAACTATCT CCAAATACAG TAGCATCATT CAAAGGAAAA
TTAAAAAGAA TTGACGGAAA GCTTACACTT TTAGCTGAAG AAGTTTTATT TGAAGAAGCA
GGAGAAGATG TATCAACAAT AAAAAATAGA TATGACAAAG ACCCGGAGAA AAAGCAAGTT
GCAGTAGCCG GTAGGCTAAT AGCACTCAGA GACCAAGGAA AAGCTGCTTT TGGACATATC
CAAGATTCGG ACGGAAAACT GCAGGTATAC TTTAACGCTG ACATTCTTGG AGAAGAAAAT
TATAAAAAAG CAATGGACTT AATAGATATT GGAGATATTA TTGGCGTAGA AGGTCATCTA
TTTAGAACTA TGACAGGTGA GCTTACAGTA GAAGTTCATA ACTATGAAAT ATTAGCAAAA
TCTTTAAGAC CACTTCCGGA AAAATGGCAC GGACTAAAAG ATACTGAGTA CAGATACAGA
TACAGATACT TAGATTTAAT AGCAAATCAA AGAACGAGAG AAATCTTTAA AATAAGGTCT
AAGGCAATAA AAAGTTTGAG AGAGTTTTTA GAAAGTAAAG GATTTATAGA AGTAGAAACG
CCAATACTTC AACCTGTAGC ATCAGGAGCT ATGGCAAAAC CTTTTATTAC ATATCACAAC
GCACTTGATA TGAATCTGTA TCTAAGAATT GCACCAGAGC TTTATTTGAA AATGCTTGTA
GTTGGTGGAT TTAATAGAGT TTTTGAGATA GGAAGAAATT TCAGAAATGA AGGGATAGAT
ACAACGCACA ACCCAGAATT TACGATGGTT GAGTTTTACG CAGCATACTT AGACTATAAC
GACTTGATGG CATTGACAGA AGAGCTGTTT AGAAAAATAC TTCTTGATAC AGTTGGAACG
TTAAAAATAA CATGGGAAGG CCAAGAGCTT GATTTTGAAA AACCATTTAG AAAAGTAGCA
TTTTTTGATG CATTAAAACA AAAAACAGGA AAAGATAAAG AATTTTTCTT AGATTTTGAA
AAAGCAAGAA ATTTTGCAAA AGAGGTAGGA ATACCAAAAG CAGATACATT AACCCATGTG
AAAATTCTTG ATAAACTTTT TGAACATTTT GTTGAAGAAG ACCTTATCCA GCCTACATTT
GTAATAGATT TTCCAAAGAT ACTATCACCA CTTGCAAAAA CACACAGAAA CGACCCAGAT
TTAGTAGAAA GATTTGAGCT TATCATAAAT AAAAAAGAGC TTGCAAACGC TTATACAGAG
CTAAATGACC CTATGGACCA AAGAGAAAGA TTCATCCAAC AAATCAGAGA AAAAGAGATG
GGCGATGAGG AAGCAATGGA CATTGATGAA ACATTCTTAA CAGCTTTAGA GTATGGTTTA
CCACCTACAG CAGGTGAAGG AATTGGAATA GACAGACTTG TAATGATGCT TACAGACAAT
TACTCAATCA GAGAAGTAAT CCTATTTCCA ACTCTTAGAC CAGAAGGACA GTAA
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| Protein sequence | MAEGILESRL EKIRKLTEEG KNPYPHKFSI TTDLKSVREG LEFEPEDKEY IIKGKIKRVS
KKENDYFIRF EDLNGHYEIQ VIFPQKEKLS PNTVASFKGK LKRIDGKLTL LAEEVLFEEA
GEDVSTIKNR YDKDPEKKQV AVAGRLIALR DQGKAAFGHI QDSDGKLQVY FNADILGEEN
YKKAMDLIDI GDIIGVEGHL FRTMTGELTV EVHNYEILAK SLRPLPEKWH GLKDTEYRYR
YRYLDLIANQ RTREIFKIRS KAIKSLREFL ESKGFIEVET PILQPVASGA MAKPFITYHN
ALDMNLYLRI APELYLKMLV VGGFNRVFEI GRNFRNEGID TTHNPEFTMV EFYAAYLDYN
DLMALTEELF RKILLDTVGT LKITWEGQEL DFEKPFRKVA FFDALKQKTG KDKEFFLDFE
KARNFAKEVG IPKADTLTHV KILDKLFEHF VEEDLIQPTF VIDFPKILSP LAKTHRNDPD
LVERFELIIN KKELANAYTE LNDPMDQRER FIQQIREKEM GDEEAMDIDE TFLTALEYGL
PPTAGEGIGI DRLVMMLTDN YSIREVILFP TLRPEGQ
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