Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1556 |
Symbol | |
ID | 6331548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1599942 |
End bp | 1600928 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642657831 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_001931708 |
Protein GI | 188997457 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00019648 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCT ACAAAATTGT TATAGGAGTT GATGTATCTA AAAACTCATT CACTGCTACA GTTTTGTATG ATAACAAGAA AGAAACTTTT GAAGTTAAAT CTGACCCGGT TGAGTTTGAA ATGAAAGTAA AGCCATTTTT GAAGAAGTTT AAAAAGTCAG ATATGCTTAT CATAATGGAG CATACGGGAG TTTACCATTT AAAGCTTGCT AATTATCTGT ATGAAAATGA CTATAATGTA GCAGTAATAA ATCCATTTTC GATAAAGAAA TTTATGGAAG CTAAAATGAC AAGAGTCAAA ACAGATAAAG CTGATTCATT CTTTATTGCA GAATATGGAA GAACGTTTTT CGATGGAGAG CTTTATAAAC CAAAATCAGA TGTAGAAAAA GAAATAGAAG TAAAACTAAA GATATTGGAA GACTTACAAC AGCAGCTTAC AATGCTAAGA AACAAAAGAG AATCGTTAAC CTATGTACCA ATGAAAAAAT TGAAAGAGAA TTTAGAATAT TACGATGAGC TAATTAGAAA AATAGAAAAA AACATAAAAG AACTTGAGAA AGAGATAAAA GAATTGTCTA AGAAGAATTA TCAAGAGGAA TACAAACTTT TAAAAAGTAT ACCTGGTATA AGTGATAGGA CTATAGGAAT GATAATATCA GTATATGGAA ATTTTGAAAG ATTTAAGAGT GTAAAAGATA TATCGAGTTT TATAGGAATT AATCCAAGCC CATATGAAAG TGCAGCATGT GTAAAGAAAA GTGTCCGGAT AAAAAAGATG GGAAATCCAT ATGCAAGGAA AATATTATAC ATGGCAGCAT TATCAGCAAT AAGGTTTAAC AAATACTGCA GAGAATTATA CGAGAGGTTA GTAAGTAAAG GTAAGGCTAA AAAGTTAGCA TTAGTAGCTG TAGCACATAA GTTATTAAGG CAAGCATATG GTGTATTAAA AAGCAGAAGA CCATTTGATG AAAATTTTTG TACTTGA
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Protein sequence | MNSYKIVIGV DVSKNSFTAT VLYDNKKETF EVKSDPVEFE MKVKPFLKKF KKSDMLIIME HTGVYHLKLA NYLYENDYNV AVINPFSIKK FMEAKMTRVK TDKADSFFIA EYGRTFFDGE LYKPKSDVEK EIEVKLKILE DLQQQLTMLR NKRESLTYVP MKKLKENLEY YDELIRKIEK NIKELEKEIK ELSKKNYQEE YKLLKSIPGI SDRTIGMIIS VYGNFERFKS VKDISSFIGI NPSPYESAAC VKKSVRIKKM GNPYARKILY MAALSAIRFN KYCRELYERL VSKGKAKKLA LVAVAHKLLR QAYGVLKSRR PFDENFCT
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