Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1466 |
Symbol | |
ID | 6331138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1513633 |
End bp | 1514364 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642657743 |
Product | hypothetical protein |
Protein accession | YP_001931622 |
Protein GI | 188997371 |
COG category | [R] General function prediction only |
COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000189703 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAATATTG AGTATAAATT TTTTCTCTCT TATGCTCTTG TACTGATTTC AATGTACATA ATCTACAAAG AGAAGATAGG GTTAGAAAAA GATGTATTAA TTAGCAGCAT TAGGGCCTTT TTTCAGCTTT TGATACTTGG CTATGCTTTA ATATACATTC TAAAGCTTTC TAATCCATTT GAGCTAACTT TAATATTATT TTTTATGATA TTATTTGCAA CATTTACAGC ACAAAGAACA GTTAAAATTT ACGATGGTTA CAAAATTGCG TTTTTATCAA TATTTCTGTC TTCATTTATA ATTATAGGAA TCTTAGTTTT GCTTGGAGTT TTACAGTTAA AGGCCAATGA GATTGTTCCA ATCGGTGGAA TGATTATAGG CAATGCTTTG AATGCTTATA CTCAAACGAT AGAAAGATTT AGAAGTGATG TTAAAAATAA TTTAGATTTA ATAGAAGCTT TTCTTGCTAT TGGTGCATCT TTAAAAGAAG CAGAAAAAAT TCAGATTAGA AACTCTATTA AAGCAGCAAT GATACCTATC TTAAACAATC TTAAAACTCT TGGCATCATA TGGATACCGG GCATCACAGC AGGTATGGTA TTAGCCGGAG CTGATCCATT GCAGGCTGTA TTTTTCCAGC TTGTAATTAT GTATAGTATG CTAAGCGTTG CAGTTTTTAC TTCTTATTTT GCAACAAATT TATCTTATAA AAAGATACTA TGGTCATTGT GA
|
Protein sequence | MNIEYKFFLS YALVLISMYI IYKEKIGLEK DVLISSIRAF FQLLILGYAL IYILKLSNPF ELTLILFFMI LFATFTAQRT VKIYDGYKIA FLSIFLSSFI IIGILVLLGV LQLKANEIVP IGGMIIGNAL NAYTQTIERF RSDVKNNLDL IEAFLAIGAS LKEAEKIQIR NSIKAAMIPI LNNLKTLGII WIPGITAGMV LAGADPLQAV FFQLVIMYSM LSVAVFTSYF ATNLSYKKIL WSL
|
| |