| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1464 |
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| Symbol | |
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| ID | 6331136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1511414 |
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| End bp | 1512802 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657741 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001931620 |
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| Protein GI | 188997369 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000299867 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTT TATCTCAAAA AGTAGAGTTC GATATTGATA TGATAAAGAA ATACGATAAG
CCAGCACCAA GATATACCAG TTATCCACCG GCTACAGAAT TTACACCAGA TATAGATAAA
GCTGAGTATG TAAAGAAAAT AATCCAATCT AATGAAAGAA AAACGCCATT ATCTCTATAT
TTCCATATAC CTTTTTGTGA AAATGCTTGT CATTTTTGTG GCTGTAATGT AATCATTACA
AGAAGAAAAG AAGTAGTTAA GCCTTATTTA GACCATATTT ATAAAGAGAT GGACCTATAT
AAAACCCTTA TTGATGCTAA CAATAGAAAA GTTGTTCAGC TTCATTGGGG TGGTGGTACT
CCAAACTATC TTTCAGATGA AGAGACAGTA GAACTTTTTG ATGAGATTAA AAAAAGATTT
CAAATAGATG AAAAAGCAGA AATATCAATA GAAATAGACC CAAGACATGT TGATAGAGAT
AGAATTTTCC TACTGAGAAA GATAGGTTTT AACAGAGCAA GCTTTGGAAT TCAAGACTTT
AATCCAAAAG TACAACAGGC GGTAAACAGA ATCCAGCCAG AAGAGATGAT TTTAAACGTT
ATGAAATGGT TCAGAGAAGC AGGCTTTGAA AGTGTAAACA TAGATTTAAT CTATGGACTA
CCTTATCAGA CACTTGAAAC CTTTTCAGAT ACAATAGATA AAACAATTAA ATTAAACCCG
GATAGGATCG CAGTTTTTAA CTTTGCATAT GTTCCATGGC TTAAAAGATT ACAAAGAAAT
ATAGATGAAA AAACTCTTCC GCCACCGGAG GAAAAACTAA AAATTCTCCA AATGACAATA
GAAAAGCTTA CAAAATCAGG CTATGTGTTC ATCGGTATGG ACCACTTTGC AAAGCCGAAT
GATGAGTTGG CAATAGCACA AAGAGAAAGA ACTCTTCATA GAAACTTCCA AGGATACACA
ACAAAGGCAG AAGCTGAGCT TTTTGGATTT GGAGCTACCT CTATAAGCAT GCTTTATGAC
GCTTACGTTC AAAACTACAA AGTTTTAAGA GAATATTATG AGCCAATAGA AAACAGTCAG
CTACCAATAG AAAGAGGAGT CTATCTAGCA CAAGATGATA TTATTAGAAG AGAAGTTATA
ATGAAGCTCA TGTGTCATTT TAGACTAATA AAATCAGAAA TAGAAGAAAA ATTCAACATA
AAATTTGATG AGTATTTTAA ACAAGAATTA GAAAGCTTAA AAGAAATGGA GGAAGATGGA
CTGTTGATAT TATATCCAGG CAGAATAGAC GTGTCGCCTA TTGGAAGACT TCTAATCAGA
AATATCGCAT CTACTTTTGA TGTATATTTA AGAAACAAAA AAGAAAGAAG ATTTTCAAAG
GCTATATGA
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| Protein sequence | MEFLSQKVEF DIDMIKKYDK PAPRYTSYPP ATEFTPDIDK AEYVKKIIQS NERKTPLSLY
FHIPFCENAC HFCGCNVIIT RRKEVVKPYL DHIYKEMDLY KTLIDANNRK VVQLHWGGGT
PNYLSDEETV ELFDEIKKRF QIDEKAEISI EIDPRHVDRD RIFLLRKIGF NRASFGIQDF
NPKVQQAVNR IQPEEMILNV MKWFREAGFE SVNIDLIYGL PYQTLETFSD TIDKTIKLNP
DRIAVFNFAY VPWLKRLQRN IDEKTLPPPE EKLKILQMTI EKLTKSGYVF IGMDHFAKPN
DELAIAQRER TLHRNFQGYT TKAEAELFGF GATSISMLYD AYVQNYKVLR EYYEPIENSQ
LPIERGVYLA QDDIIRREVI MKLMCHFRLI KSEIEEKFNI KFDEYFKQEL ESLKEMEEDG
LLILYPGRID VSPIGRLLIR NIASTFDVYL RNKKERRFSK AI
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