Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1460 |
Symbol | |
ID | 6331598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1504651 |
End bp | 1505337 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642657737 |
Product | 3-dehydroquinate dehydratase, type I |
Protein accession | YP_001931616 |
Protein GI | 188997365 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0710] 3-dehydroquinate dehydratase |
TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000588162 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAAAA AAACACCAAT GATTGCACTG CCCATAACAG ACAAAGATTT AGAAATCACA TTAAACAATG CAATTATAAA TAGTATCGAT ATTATTGAAC TACGTATAGA CCAATTTGAA AACAAAGAAT TAAATCACAT AAAAGAAGTG GCTAATAAAG TTAAGTATTA TGATTTTTAT ACCATCGCAA CCGTAAGAAG TAAGTTAGAA GGAGGGTCAG ATATACCGGA TTCTGAAAGA TTGAAAATCT TCAATGCTGT TATTGATTTT GTTGATATCA TAGATATAGA GTACACATCA ACAAACATAA AAGAAAAAGT TAAAGAAATT GCCAAAAGCA AAGGTAAATT GCTTTTAATG TCTTATCATG ATTTTGAAAA AACACCGACA GAAGATGAAA TCCAAAAATT AATTGACGAT TGTAAAATCC AAGGAGCAGA TATAGTAAAA TATGCCTTTA AAGCCAATAC CTTTGAAGAT GTGGCAAGGG TTATGTGTAT CACTAATAAA AATAAGGATA AAAATATTGT TGCTATATCA ATGGGTGAGA TTGGCAAAAT TACAAGAGTG ACTGGATTTA TGTTTGGAAG TTTGATAACA TATACGTATA TAGGACAATC TTTCGCACCA GGTCAAATAG AAGTTAAAAA ACTAAATGAA TTAATAGAAT TTTTCAAAGG AGGTTAA
|
Protein sequence | MFKKTPMIAL PITDKDLEIT LNNAIINSID IIELRIDQFE NKELNHIKEV ANKVKYYDFY TIATVRSKLE GGSDIPDSER LKIFNAVIDF VDIIDIEYTS TNIKEKVKEI AKSKGKLLLM SYHDFEKTPT EDEIQKLIDD CKIQGADIVK YAFKANTFED VARVMCITNK NKDKNIVAIS MGEIGKITRV TGFMFGSLIT YTYIGQSFAP GQIEVKKLNE LIEFFKGG
|
| |