Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1429 |
Symbol | |
ID | 6331472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1469589 |
End bp | 1471595 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642657706 |
Product | PDZ/DHR/GLGF domain protein |
Protein accession | YP_001931585 |
Protein GI | 188997334 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000479067 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTA TTATTAAAAT TGTAATTGTA GTATTAGCAT TATCTCTATT TAGTTGTACA GAAACCTTAG AAATATCAAA AAATGCTGAG CGATATTTTT CTTCTGGTCA ATTAAATGAA GCGATAAACG AATATAAAAA ACTTGGTGAT AATACTGCAG CGCTTTTTCT TATAGGTGTA GCATATTATA TGCAAGATAG ATATCAAGAA TCCATTTCTT ATATGAACAA AGTTATTGAT TTATGTTCGG AAGGTAAACC ATGCCCTTTG ACTGTTGATA TGATAGGATT TTGGTCTGGA AAAGCACATT TGGCAATAAA AGATTATGAT AAAGCAATAC ATTTACTAGA GATCGCAGCA AAAGAGTCAA AAGAAAATCC AAGTGAACCT CTTTGGCAAG GTTTCTATTC GAGATTTGTT CCTAAAAAAA GTGAGGCTCT TTCATTGCTT GGCAGTGCTT ATTATTTGAA AGGAGAATAT CAAAAAGCAG TTGAAGCTTT AAATGAATCA ATAAAATTAG ATCCCAATCT TTCCGATCCA TTTTTCTTCC TTGCGATGTC CTATGGAAAA TTAAAAGAAT ATGGTAAGGC GGTTGAAGCT GCAAAAAGAG CAATCGAGCT TGACCCTAAA GCCCCTACTT ATTATGCAGT TTTAGGCCTT ATATATAAAG ACCAGAAGAA ATATAAAGAA GCTGAAGAGA ATCTTAAAAA GTCTATAGAA TTAGATCCAA AGTCCATTGT TTCTTATCTA AAACTGGCAG ACCTCTATTA TGAAAAAGAA TCTTATAAAG AAGCTGTAAA TACCCTTACA AAGGTATTAG AAATTAATCC ATCAAACATG GAAGCTAATT ATTCGCTAAT ATATACCTAT ATGGCTATGG GACAATTTGA TAAGGCAATA GAAAGTGCAA ACAAAGCAAT TAAACATAAT ACGATAACTG AAGCCGGCAT AAGGATAAAA AAAGCAGAAG GAGATTACCC TGTTGTTGAA ATGGTATCTG AAGACAGTCC AGCAAAGATG GCTGGTATAG AGATAGGAGA TAAAATCATC AGAGTTAATA ATCAATCAAC AGAGAAATTA AAACTTGAAG ATGTAATTAA TCTATTGCGT GGTGAAGAAG GAACTCGGGT TACATTAATC ATAAAAAGAG GTGATAAAGA ATTTGAAAAA ACAATTACAA GAAAAACAAT GATTGACAAA ATAGTATCTG TATTTTTTGC CGAGAGGAGT CTTTGCTATA GAGAGAAAGG TAATCTTGAT CAGGCTATGA AAGACGCAGA AAAGGCATAC TCATTTAATT TAAATTTAGA TAATATAAAA GAAGCTCTTG GTGCTGTTTA TATTGATAAA GGAAAGTATG ATGAAGCCAT AAATATCCTT TCTTCTACAG ATAAGGATAA TAATTTTTCC AAGTTATTGC TTGCAACAGC CTATGCCAAG GCTGGTAAAT TTAATGAAGC TGTAAGTGTT TATAAGAATA TCCCTGAAGA TTATTTAATA ACCAAATCAG TTTTAAGAAA TAATGCAATA AACACTCTTT ATAACGCATT AAAGCCTTAC AAAGATAATT TGATGCAAAG CATTAAGGCT CTTGAAGCAA AAGGTCAATA TAAAGAGGCA ATTAAAGAGT ATGCAAACCT TTTAAGGATA TCTGATGAGA AAGAAGCAAA AGAAATAAGA ACTCATATTG CAGAACTTAT GATTAAATAT CCACATCTTT TTGCTTTACC AGAAGAAGCA AGAAGATCTG TAATAAAAGC AGAAGCATTT ACAGAAGAAG GGAAATTTGA AAAAGCGATT GAAGAATATC AAAAAGCTTT AGAATTATCA CCTTTTTATC CTAATCTTTA TAAGGCGCTG GCATTAAGTT ATGGCCAGAT TAAAGACTAC AAAAAAGCAA TTAAGAATAT GAATATTTAC CTTGAACTCT ACCCCGATGC TCCTGATATT AGGGCAGCCA AAGATCAGAT TTATAAATGG GAATTTATGA TGGAAAAAGG AGAATAA
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Protein sequence | MKSIIKIVIV VLALSLFSCT ETLEISKNAE RYFSSGQLNE AINEYKKLGD NTAALFLIGV AYYMQDRYQE SISYMNKVID LCSEGKPCPL TVDMIGFWSG KAHLAIKDYD KAIHLLEIAA KESKENPSEP LWQGFYSRFV PKKSEALSLL GSAYYLKGEY QKAVEALNES IKLDPNLSDP FFFLAMSYGK LKEYGKAVEA AKRAIELDPK APTYYAVLGL IYKDQKKYKE AEENLKKSIE LDPKSIVSYL KLADLYYEKE SYKEAVNTLT KVLEINPSNM EANYSLIYTY MAMGQFDKAI ESANKAIKHN TITEAGIRIK KAEGDYPVVE MVSEDSPAKM AGIEIGDKII RVNNQSTEKL KLEDVINLLR GEEGTRVTLI IKRGDKEFEK TITRKTMIDK IVSVFFAERS LCYREKGNLD QAMKDAEKAY SFNLNLDNIK EALGAVYIDK GKYDEAINIL SSTDKDNNFS KLLLATAYAK AGKFNEAVSV YKNIPEDYLI TKSVLRNNAI NTLYNALKPY KDNLMQSIKA LEAKGQYKEA IKEYANLLRI SDEKEAKEIR THIAELMIKY PHLFALPEEA RRSVIKAEAF TEEGKFEKAI EEYQKALELS PFYPNLYKAL ALSYGQIKDY KKAIKNMNIY LELYPDAPDI RAAKDQIYKW EFMMEKGE
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