| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1395 |
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| Symbol | |
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| ID | 6332390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1436996 |
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| End bp | 1438408 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642657677 |
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| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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| Protein accession | YP_001931556 |
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| Protein GI | 188997305 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000275666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TTTTAAAAAT AATCCTTTTA CTTGTGTTTG ATTTATCTGC ATATTATCTG
TCTTTGTATT TAGCATTTTT AACAAGAAAG TTTTTATCCG TCAGTATTCT AAAAGATATT
GATTACAATT ATACTTTTAG CTATCTTCTA AGTTTTTGGT GGATACCAAT TATTTTTCTA
TTTTTCCTGT GGTATGAAAA ATTATATACA AAAAACTATC CATTTTGGGA TGAGATCAAA
CAAATTATAC GAGCTATTAG TTTTTCTATT ATTTTTATAT TTTTTATATT GTCCCTATCA
AAACAAGCTC ATTTAGTCTC AAGGTTGACG ATAATCTTCT TATATTTCTA CTCGATAATA
TTTTTCCTTT TATTTAGGCA TTTTGGTAAA AAAATTTTGT TTAGCTTCTA CAGAAATCCT
ATCTTAATTA TTGGCGCTGG CGAAACAGGA AAGAGTGTAG CAAAAAGTAT AATAGAAGAC
CCGCATCTTG ATTTTGAGAT TAAAGGTTTT TTAGATGACA ATAAAGAAGG ATATATTGAA
ATAAACAATA AGAAATATCC AATTCTTGGA AAAATTTCTA ATATAGAAAT TCTTAATGAA
ATAGACACAG TAATCATTGC AATGCCATCT ATAAATTCAA ACAATCTTAA TGACTTGATT
AATAAAATTC ATAGACATAC AAAAAATGTA TTTATTATCC CGGCTTTAAA TGATATAGGT
TTGTTAAATA GTGAAATTTA TAATTTATTT AATGAAAAGA TGTTTTTACT TAAAATTGAA
AATCATTTAG AATCCGGCAT AAATCAAGCC ATAAAAAGAT TTTTTGATTT AACTTTATCG
GTCTTAATGC TACCTATCTT ATTGCCTACC ATACTAATTA TTGGAGTATT AATAAAGCTG
GACAGTAAAG GTCCTATTTT TTATACTCAA GAAAGAATAG GAAAAAATGG TAAAAAATTT
AAGGTAATAA AATTTAGGTC AATGTATACA AATGCAGATG AGTTATTAAA GGAGTTTTTA
GAAAAAAATC CTGAACTAAG AGAGGAGTTC GAGACTTTTA GAAAATTAAA AAATGATCCA
AGAGTGACAA AAGTTGGAAG ATTCTTAAGA AAAACTTCAT TAGATGAACT GCCTCAAATA
TTTAATGTTT TAAAAGGTGA AATGTCCTTA GTTGGTCCAA GACCGGTGAC TAAAGAAGAA
ATTGATAAAT ATTATAAAGA TTACGCAATC TATTATTATG AAGTTTTGCC CGGTATTACA
GGCTTATGGC AGATTAGTGG AAGAAGCGAC ACTTCTTACG ATGAAAGAGT TGAATTAGAT
GTTTGGTATG TGAAAAATTG GAATTTATGG CTTGATATAG TTATCTTAAT AAAAACTATT
AAAGTTGTTT TAAAGAGAGA GGGGGCTTAT TGA
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| Protein sequence | MKKILKIILL LVFDLSAYYL SLYLAFLTRK FLSVSILKDI DYNYTFSYLL SFWWIPIIFL
FFLWYEKLYT KNYPFWDEIK QIIRAISFSI IFIFFILSLS KQAHLVSRLT IIFLYFYSII
FFLLFRHFGK KILFSFYRNP ILIIGAGETG KSVAKSIIED PHLDFEIKGF LDDNKEGYIE
INNKKYPILG KISNIEILNE IDTVIIAMPS INSNNLNDLI NKIHRHTKNV FIIPALNDIG
LLNSEIYNLF NEKMFLLKIE NHLESGINQA IKRFFDLTLS VLMLPILLPT ILIIGVLIKL
DSKGPIFYTQ ERIGKNGKKF KVIKFRSMYT NADELLKEFL EKNPELREEF ETFRKLKNDP
RVTKVGRFLR KTSLDELPQI FNVLKGEMSL VGPRPVTKEE IDKYYKDYAI YYYEVLPGIT
GLWQISGRSD TSYDERVELD VWYVKNWNLW LDIVILIKTI KVVLKREGAY
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