| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1336 |
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| Symbol | |
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| ID | 6331534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1376427 |
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| End bp | 1377647 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642657619 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001931498 |
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| Protein GI | 188997247 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACA TAGATGAATT ATATTTAATC ATTACAGATG AAAATTTAAA GATAAAAAGA
ATTAGTGAAA GTCTTTTAGA ACTTCTTGGT TATGAACATT TTGACTTAAT AGATGAAAAT
CTTAACAAAT TTACAGATAG GAACATTAAA GAATTTTTAG ACCAAAAAGA ATTTGTAATA
TTTCTAAAAA GCAAAAGAGG AATTCAATTT AAAGGCTATT TTAAAACCAC AGTCTTGTAT
GATTATTTCA ACAATCCAAA AGGATATCTA TTTCAATTTT TAGAAACAAA AGATGAAAAG
ATAGATGAAG ATTTTATGGT CTTTAACACT CAAAACATAA AGATGAAAAA AATCTTAGAA
AGAGCTTCTT TGGTAGCTCA ATCAGATGTA TCTGTTTTGA TTTCTGGAGA AACAGGGACA
GGAAAATCAA AACTTGCTAA ATGGATCCAT TTAAACAGCG TTAGAAGTAG GAATAATTTT
GTATCGGTAA ACTGTTCAGC CATTCCGGAT ACGCTTTTTG AGTCAGAATT TTTTGGCTAT
GAAAAAGGTG CGTTTACTGG AGCGGTTGGC TCTAAACCCG GTAAAGTTGA ACTTGCAGAC
GGCGGAACAT TATTTTTAGA TGAAATTGGA GACCTTTCTT TAACTTCCCA AGCAAAATTA
TTAGTTTTTG TAGATACGAA AGAATTTGAA AGACTTGGTT CAAGCAAACC AAGAAAATCT
GACGTAAGAA TAATCTCAGC TACAAACAAA GACTTGATTA AAGAAATTCA GAATAAAAAT
TTTAGAAGTG ATTTATTTTA TAGATTGTGC GTCGTTAGAA TAGAAATTCC ACCATTAAGG
GAAAGAAAGG AAGATATTCC TTTGATAGTA AATAGCATTT TAGCTAAGAA AAACAAAAGA
ATTTCACAGC AAGCTATGGA TGCTATAGTT TCAAAAGATT GGTATGGTAA TGTCAGAGAG
CTTAGAGCTT TCTTAGAAGC AGTTAGCATT TTTACAGCTA ATAAAGAAAT TATAGACGTG
GAAGATCTGA ACTCTGAATT TGTTTATTTT TCAGAAGAAG GAGATGTAGA AATTTCAGAA
GAAGTTCTTT TTAATGAAGA AAAAAGAATA ATAGAAGCAT TGAAGAAATC AAAAGGAAAC
AAAAGTAAAG CTGCTAAGCT TCTTGGAATT AGCCCTGCTA CGTTGTGGAG AAAAATAAAG
CAGTATAAGA TTGAAGTATA G
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| Protein sequence | MNYIDELYLI ITDENLKIKR ISESLLELLG YEHFDLIDEN LNKFTDRNIK EFLDQKEFVI
FLKSKRGIQF KGYFKTTVLY DYFNNPKGYL FQFLETKDEK IDEDFMVFNT QNIKMKKILE
RASLVAQSDV SVLISGETGT GKSKLAKWIH LNSVRSRNNF VSVNCSAIPD TLFESEFFGY
EKGAFTGAVG SKPGKVELAD GGTLFLDEIG DLSLTSQAKL LVFVDTKEFE RLGSSKPRKS
DVRIISATNK DLIKEIQNKN FRSDLFYRLC VVRIEIPPLR ERKEDIPLIV NSILAKKNKR
ISQQAMDAIV SKDWYGNVRE LRAFLEAVSI FTANKEIIDV EDLNSEFVYF SEEGDVEISE
EVLFNEEKRI IEALKKSKGN KSKAAKLLGI SPATLWRKIK QYKIEV
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