Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1313 |
Symbol | |
ID | 6331871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1349916 |
End bp | 1351325 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642657597 |
Product | D-lactate dehydrogenase (cytochrome) |
Protein accession | YP_001931477 |
Protein GI | 188997226 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.130987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAG TTAAACAGGT TGAAAAAATA CTGGTACCGG ATAGGGTTAA AAGAGCATTA AAAGAAGCAA TTGGAGAGCA TAATGTATTA GATGATGAAA TGGATAGAAT GTTATATTCA TATGATGCAA CGAGATTAAG CTTTCCGCCG GATGTGGTTG TAATACCAGA AAGTGAAGAA GATGTTAAAA AAGTAGTAAA AATTTGTTAT GAAGAAGGTA TACCAATAAC TCCAAGAGGA GCAGGTTCGG GCTATACCGG TGGTGCTATT CCGGTAAAAG GTGGAGTATT AATCTCTTTT GAAAAGATGG ATAAAATTTT ATGGATTGAC GAGGACAACG CAGTTGCAAA AGTTCAACCG GGTGTAATTA CTTATAGACT TCAGCAGGCA GTAGAGAAAA GAGGATTATT CTATCCACCA GATCCGGCAA GTTATAAATT CTGCACGATG GGTGGAAATG TAGCTGAAAA TGCAGGTGGT CCAAGATGTG TTAAGTACGG CGTAACAAGA GAGTATATCA TGGAGCTTGA CACTGTAATT TATACAGGAG AAACAATCCA TACAGGAAGA ATAACATTAA AAGATGTTGC TGGATATGAT TTAACAAGAC TTTTAATCGG CAGTGAGGGA ACGCTTGGAA TATTTACAGG AATAACAGTC AAATTAATTC CAAAACCAAA AGCTAAGAAA ACAGTAAAAG CTGTATATAT GGACTTAGAA TCTGTAGGAA AAACAGTTAA AGATATATTT AAAGCCGGAA TTTCACCGTC AGCTCTTGAA TTTATGGATA ATCTTGCAAT AAATGCAGTA GAAGATTTCG GGCATTTTGG ATTAGATAGA GACGCAGAAG TTATACTTTT AATAGAAGTT GACGGTCATC CAAAAGCTCT TGAAGATGAG ATTGTAGAAG TTGCTAAGAT ATGTGAAATG AACGGTGCAA AAGTTGAAGT TGCTAAAACA GACAGAGAAG CAGAGAAACT TTGGGAAGCT CGTAGGTCTT TATCTCCAGC AGTTGCAAAA CTTGGAAGAA CAAAAATAAA CGAAGATATA GTATTTCCAA GAAGCTATTT ACCAGAGGCA CTTCCAAAGC TTAGAGAGAT TGGAAGAAAA TATAACTTAA AAATGGTGAA CTTTGGACAT ATTGGAGATG GAAACGTTCA TGCTAACTTT ATGATAAATG GATTAGACCC GGATGAAGTA GCAAGAGCAG AAAAAGCTGT TGAAGAAGTT TTTGACTTAG CATTATCTTA CAGAGGTTCT ATCACTGGTG AACATGGGGT TGGTATAACA AAGGCAGAAT TTATGAGAAA ACAATTTTCT CCACAAGAAA TGGAATTGAT GAAGAAAATC AAAAGAGCAT GGGACCCGGA AAACTTAATA AATCCTGGAA AGATGGGATT AGACGATTAA
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Protein sequence | MFKVKQVEKI LVPDRVKRAL KEAIGEHNVL DDEMDRMLYS YDATRLSFPP DVVVIPESEE DVKKVVKICY EEGIPITPRG AGSGYTGGAI PVKGGVLISF EKMDKILWID EDNAVAKVQP GVITYRLQQA VEKRGLFYPP DPASYKFCTM GGNVAENAGG PRCVKYGVTR EYIMELDTVI YTGETIHTGR ITLKDVAGYD LTRLLIGSEG TLGIFTGITV KLIPKPKAKK TVKAVYMDLE SVGKTVKDIF KAGISPSALE FMDNLAINAV EDFGHFGLDR DAEVILLIEV DGHPKALEDE IVEVAKICEM NGAKVEVAKT DREAEKLWEA RRSLSPAVAK LGRTKINEDI VFPRSYLPEA LPKLREIGRK YNLKMVNFGH IGDGNVHANF MINGLDPDEV ARAEKAVEEV FDLALSYRGS ITGEHGVGIT KAEFMRKQFS PQEMELMKKI KRAWDPENLI NPGKMGLDD
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