| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1275 |
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| Symbol | |
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| ID | 6332644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1317772 |
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| End bp | 1319445 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642657560 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001931440 |
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| Protein GI | 188997189 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.208811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGTG ATGAGATTAA AAAAGGGATA GAAAGAGCAC CACACAGAAG CTTGCTTAGA
GCCTGTGGAC TTAAAGAAGA AGATTTTGGA AAACCATTTA TCGGCATTGC TAACTCTTAC
ATAGATATAA TACCCGGACA CGTTCATCTT CAAGAATTTG CAAAAATCGT TAAAGAAGCT
ATCAGAGAAG CAGGGGGAGT TCCATTTGAG TTTAACGTGA TCGGCGTTGA TGATGGAATA
GCAATGGGAC ACTCTGGAAT GTTTTATTCG CTGCCAAGTA GGGAGCTAAT AGCTGATAGT
GTAGAAACGG TTGTTCAAGC ACATAAATTA GACGGATTAG TCTTAATACC AAACTGTGAT
AAGATCGTAC CTGGAATGAT AATGGCTGCT GCAAGGGTCA ATATTCCTAC AATCCTTGTA
AGCGGTGGAC CTATGGCAGC AGGTCATACA TCAGATGGAA AACCAATAGA CCTTGCTACG
GTTTTTGAGG CTGTCGGTGG AATAAAAAAA GGATTGATAG ATGAAAAACA ATTGATAGAC
ATAGAAACTC ATGCTTGTCC TACATGTGGT TCTTGTTCTG GAATGTTTAC TGCAAACTCT
ATGAACTGTC TTGCAGAAGC TCTTGGAATA GCATTACCTG GAAATGGTTC AATTCTTGCT
ATAGACCCAA GAAGAAAAGA ATTGGCAAAA CAAGCAGGAA GGCAAATAGT AGAGCTTGTT
AAAGCTGGAT TAAAATTTAG AGATATAGTT AATCAAGAAA CTATTGAAAA TGCATTTACT
CTTGATATTG CAATGGGTGG CTCATCAAAT ACTGTTTTAC ACCTACTTGC CATTTCGCAT
GAAGCTGGAA TAGAATTTCC GATGGAGAAA ATAGATGAAA TTTCACGAAA AACACCAACT
CTTTGTAAAT TAGCCCCAGC TTCCCAGTAT CATATGGAAG ACTTAGATAA AGCTGGTGGA
ATTTATGCAA TCTTAAAAGA GCTTTCTAAA AAGAATTTAC TACATTTAGA CAGACCAACA
GTTTTGATGA AAACTATCGG AGAAGCAATA AAAGATGCAG AAATAAAAGA CACAAATGTA
ATAAGACCTT TAGAAAATCC TTACAATGAA ACAGGCGGTC TTGCAGTATT GTTTGGAAAT
CTTGCACCGG ATGGAGCAGT TGTAAAGGCT GCCGCAGTAG ACCCAAAAAT TTTAGTCCAC
AGAGGAACAG CTGTAGTATT TGACAGTGAG GAAGAGGCAA TAGAAGGCAT TACAAACGGA
AAGGTAAAAG AAGGAAATGT TGTTGTGATT AGATACGAAG GTCCAAAAGG TGGACCAGGA
ATGAGAGAGA TGCTGGCTCC TACTTCAACA ATCATGGGAA TGGGACTTGG AGATAAAGTC
TCATTAATCA CAGATGGAAG ATTTTCTGGG GCTACAAGAG GAGCTTGTAT AGGACATGTT
TCTCCAGAAG CTGCAGCAGG TGGTCCTATC GGAATTGTCC AAAACGGAGA CGAAATTTTA
ATAGATATAC CAAATAGAAA AATTGAACTT TTAATATCTG AGCAAGAGTT TGAAAGAAGA
ATGAAAGAGT TTAAACCAAA GAAAAAAGAA ATACCAAGCC CATGGCTAAG AAGATACTCT
AAATTTGTCA CATCGGCAAA CAAAGGTGCA ATTTTAAGCG ATGAATGCAG TTAA
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| Protein sequence | MRSDEIKKGI ERAPHRSLLR ACGLKEEDFG KPFIGIANSY IDIIPGHVHL QEFAKIVKEA
IREAGGVPFE FNVIGVDDGI AMGHSGMFYS LPSRELIADS VETVVQAHKL DGLVLIPNCD
KIVPGMIMAA ARVNIPTILV SGGPMAAGHT SDGKPIDLAT VFEAVGGIKK GLIDEKQLID
IETHACPTCG SCSGMFTANS MNCLAEALGI ALPGNGSILA IDPRRKELAK QAGRQIVELV
KAGLKFRDIV NQETIENAFT LDIAMGGSSN TVLHLLAISH EAGIEFPMEK IDEISRKTPT
LCKLAPASQY HMEDLDKAGG IYAILKELSK KNLLHLDRPT VLMKTIGEAI KDAEIKDTNV
IRPLENPYNE TGGLAVLFGN LAPDGAVVKA AAVDPKILVH RGTAVVFDSE EEAIEGITNG
KVKEGNVVVI RYEGPKGGPG MREMLAPTST IMGMGLGDKV SLITDGRFSG ATRGACIGHV
SPEAAAGGPI GIVQNGDEIL IDIPNRKIEL LISEQEFERR MKEFKPKKKE IPSPWLRRYS
KFVTSANKGA ILSDECS
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