| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1236 |
|---|
| Symbol | |
|---|
| ID | 6331555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1285653 |
|---|
| End bp | 1286273 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642657520 |
|---|
| Product | phosphoribosyl-ATP diphosphatase |
|---|
| Protein accession | YP_001931401 |
|---|
| Protein GI | 188997150 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
|---|
| TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 73 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACCTTG ATAATTTAAA GTTTAATCAA GATGGATTGA TTCCGGTTAT TACTCAAAAC
TATTATACCG GAAAAATATT AATGCAAGCA TATGCAAACA AAGAAGCCAT TGAAGAAACA
TTAAAATCCG GATATGCAAC TTATTTTTCC CGTTCAAGAA ATGCTTTATG GAAAAAAGGT
GAAACTTCTG GAAATTATCA AAAAATCATG GATATAAAAG TTGATTGTGA TGAAGACAGT
ATTATATACC TTGTTGTAGA AGAAGGTCCG GCATGCCATA CAGGAGAAGA AAGCTGTTTT
TATAGAAATC TAAATCTTGA AAAAGATTCC AAGCCGGTTC CTTTTGAGAT ACTTCATAAA
CTCTATGAAA AGATTCAAGA AAGAAAAGAG ACCATGCCAG AAGGCTCTTA CGTTGCATCT
TTATTTAAAA AAGGAAGCGA TAAAATAATT CAAAAAGTTG GTGAAGAAGC CGTAGAAACG
GTTATAGCGT TAAAAAATAA AAATAAAGAT GAAATTGTGT ATGAAACATC CGATTTACTT
TTTCATCTGC TGATTGCTTT GGTTGATGCC GGCGTTAAAT TATCAGATAT AGAAGAAGAA
TTGTTAAAAA GGTATAAGTA G
|
|---|
| Protein sequence | MNLDNLKFNQ DGLIPVITQN YYTGKILMQA YANKEAIEET LKSGYATYFS RSRNALWKKG
ETSGNYQKIM DIKVDCDEDS IIYLVVEEGP ACHTGEESCF YRNLNLEKDS KPVPFEILHK
LYEKIQERKE TMPEGSYVAS LFKKGSDKII QKVGEEAVET VIALKNKNKD EIVYETSDLL
FHLLIALVDA GVKLSDIEEE LLKRYK
|
|---|
| |