Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1213 |
Symbol | |
ID | 6332559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1264108 |
End bp | 1265601 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642657497 |
Product | UDP-N-acetylmuramyl-tripeptide synthetase |
Protein accession | YP_001931378 |
Protein GI | 188997127 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAC TAAAAGAGAT ATTAACAGAT GAAAAAATAA TTTATGGAAA TCAAGAGACA GTTATAGAAG GAATTACAAA TAACAGCAAA AAAGTCGAGA AGAATTACGC ATTTTTTGCC ATTAAAGGCA CATCGGTAGA TGGTCATAAC TTTATTGACG AAGCTATAAA AAATGGTGCA TCTGTAATTT TTATAGAAGA TGAAAAGTAT GTTGAAAGTT TAAAAGGAAA AAATATAACT GTTGTTTTGA CAGATAACGG CAGAAAGTCT TTAGCTTTGG CTTCAAACAG GTTTTATGAT AATCCATCTG AAAAGTTAAA AGTGATAGCA ATTACTGGAA CAAATGGAAA GACTACAACA TCAAACTTAC TTGCCCAGTA TTATGAAATG GCCGGGTATA AAGTTGGTGT AATCGGGACA ATCAATTACA GAGTTGGAGA TGAGATATTA TCTTCAGGAC ATACAACGCC AGACCCAGTA GAATGGTTTA AAACACTTAA AGTAATGAAA GATAAAGGGG CGGATGTAGT AGTTGCAGAA GTTTCTTCCC ATGCAGCAGA CCAGTATAGA GTTTATTCAA CAAAGTTTCA TGGTGGAATT TTTACGAATC TAACACAAGA CCATCTTGAT TATCACCAAA CAATGGAAAA TTACTTCTTA GCAAAAAGAA GAATTTTTGA GCAGATTGAT GAATTCAATA AAGAAGCAAT TTACAGCATA AATGTAGATG ATGAGTATGG AAGAAGAATC TTAGATTATC TAAAAAACCA TTTAAAAGTC AATGATGACA AAATCATTAC ATACGGAAAA ACATCAGAAG ATTTTAAGAT TCTTGATTAT AGACTTTCAC TTTTTGAGAC TGAATTTAGC TATAAATATA AAGATACATT AAGCAAAATC AAAACAAAAT TGAGAGGGGT TTTTAATATT TATAATCTAT CTGCTGCCGT TTCTTTTCTT ATAAAAGATG GTTTTGATTT GAAATTCTTA GAAGAAAAAG CATTACATCT AAAGCCGATT AAAGGAAGGT TTGAAGTAAT AGAAGGGCAA GGTTTTATAG TTGTTATAGA TTATGCCCAT ACACCGGATG CACTTGAAAA CATTTTAAAA TCGTTAAATG AAATCAAAGA AAATAGAATC ATAGCAGTGT TTGGAGCAGG TGGCAACAGA GACAAGACAA AAAGACCATT GATGGGAGAG ACGGCAGAAA AACTATCTGA TATTGTAATT CTAACATCTG ATAATCCAAG AAATGAAGAC CCATTAAGTA TAATAGAAGA TATCTTAGAT GGAATAAAAG ATAAAGACAA AGTAATAACT ATTGTAGATA GAAAACAGGC AATAGAAAAA GCTATCAGTT TAGCAAAAGA AAAAGATATA ATTTTAATAG CAGGGAAAGG ACATGAAAAT TATCAGATAA TTGGCGATAA AATATTGCAT TTTGACGATG CAGAAGTAGT AAAAGAAATT ATAGACGGAG GAAAAGGTGT TTAG
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Protein sequence | MKLLKEILTD EKIIYGNQET VIEGITNNSK KVEKNYAFFA IKGTSVDGHN FIDEAIKNGA SVIFIEDEKY VESLKGKNIT VVLTDNGRKS LALASNRFYD NPSEKLKVIA ITGTNGKTTT SNLLAQYYEM AGYKVGVIGT INYRVGDEIL SSGHTTPDPV EWFKTLKVMK DKGADVVVAE VSSHAADQYR VYSTKFHGGI FTNLTQDHLD YHQTMENYFL AKRRIFEQID EFNKEAIYSI NVDDEYGRRI LDYLKNHLKV NDDKIITYGK TSEDFKILDY RLSLFETEFS YKYKDTLSKI KTKLRGVFNI YNLSAAVSFL IKDGFDLKFL EEKALHLKPI KGRFEVIEGQ GFIVVIDYAH TPDALENILK SLNEIKENRI IAVFGAGGNR DKTKRPLMGE TAEKLSDIVI LTSDNPRNED PLSIIEDILD GIKDKDKVIT IVDRKQAIEK AISLAKEKDI ILIAGKGHEN YQIIGDKILH FDDAEVVKEI IDGGKGV
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