Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1206 |
Symbol | |
ID | 6331462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1256839 |
End bp | 1258512 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642657490 |
Product | transposase |
Protein accession | YP_001931371 |
Protein GI | 188997120 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000960806 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAACCT TGCAATGCCA ACTTGAGTTT GAAAATAGGC AAGATAAAGA GATTATATTA GATTTAATGC GTAGATTCTC ATCAGCAAGT AGATACGCAT ATCAAAGATT ATTAGAAGGC AAAAAAAGAA AAGATTTAAA AAAGCAGTTA TCAAGATTGT TTAATATAAA TACAAGATAT TCAGATGATG CTATATTCTT AGCACAGTCA ATAATTTTGT TATACAAAGA AAGACAGCAA AATCCAAAAA AAGTTATCTT TGGTTCAAGG AAATTATTTG AGCAACTAAA GAAAAATCAT TTAACAGGAA AAAGAAGAAA AGAGTTAAAA GCAAAATGGA AAGAAAGCAG ACAAGGGAAT TTGTATTCAA GAGGAGATAA ATCTAAGCAA GGAAATCTAA ATTTAAGATT TCATCGGATT AATAATGAGC TTTACTTGAG AATAAACACA GGAGATAGAC AATATATCTA CGCAAGAGTA ATTAGAAGCG TTAAAAGGGA AAAAAATAAA TGGATAGATT TTGTGTTTAT GTTAGAAAAT GCATATCAGA CAGATGAATG GTTTGCGTAT AGTGTTAGAT TAAAAACAAA AAACAGCAAA ATATACGCTT TTATATCCAT AGAAGAAAAA CTACCACCTA TTACAATCAA AAGAGACAAT GGTATTATAG GCATAGATGT AAACGCATAT CCATTTCATC TTGCACTATC TTTTACAAGT AAAGATGGAA ATTTAGAGAA ATATCAAAGC ATTAATTTAA ATGAATTATT AGAAGCAAAC TCAGAAAAAA GACAGTACTT AGAATGGCTA ATAGCACATA AGATAATAAA GATAGCAAAA AAAGAGAATA AAGCTATCGC TATCGAAAAT TTAAATAAAC TACCAAAAGG TAAAAGAGGA GATGGATTTG CAAAGCTAAG AAGTAAATTA CAGAAATGGA GCTATAAAAG ATTATTAGAC AAAATAGAAA TATTAGCAAA AAGAAACGGG ATAGAAATAA GAAAAGTCAA TCCTGCATAT ACATCAGTAA TTGGAAAGCT AAAATACTCG CCACAATACA ACATAGACAA AGACATAGCA GGAGCTTACG TAATAGCAAG AAGAGGATTA GGATATAAAG AAAAATTACC AAAAAATTAT AAAGAACTGT TAAATGATAT TGATTTTCTG TCATACACCA TCGCAAGAAT TGAAGATAGT ATTACAAAAT TAAAACAAAA GATAAAAGAA GAGAAAAATG AATATAAGAG AAGCAAAATT AAAAGCAAAT TAGCAAAACT AAGAAAAAAC CTAAAAACAC TACAAAACCA CGTCTCACGT TTCACGTCTC CCGTTTCACG TTCAGAAAGT GGAAAGAGCA AGACAGCTAC CCAACATCCT GTCAACCAAC GGAAGGAACA GGTGAGGGGT CTGCCTACAG GTAGACATAA AAGCTGGCAA GTTCTTTCCA TAGCCTTAGC CTTCTGCTGT TTTGAAAGAT CGTATAGAGA TCTTTCTCCT TTGAATCGTG TAATCGTTTC AAAGGATTGG ACAGTAGTGG CTAATAGGTT AGCTCCTGTA CTTGGTGCAG GGACTATGAC ACTTCCCAAA TACCGCCTGT TGGGGTCGGA AGTGTCTGAA ATGGCGGAAT ACAAATACCC CAACCCAAGC TGTAGTTTTA TACAGTTTGG TTGA
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Protein sequence | MITLQCQLEF ENRQDKEIIL DLMRRFSSAS RYAYQRLLEG KKRKDLKKQL SRLFNINTRY SDDAIFLAQS IILLYKERQQ NPKKVIFGSR KLFEQLKKNH LTGKRRKELK AKWKESRQGN LYSRGDKSKQ GNLNLRFHRI NNELYLRINT GDRQYIYARV IRSVKREKNK WIDFVFMLEN AYQTDEWFAY SVRLKTKNSK IYAFISIEEK LPPITIKRDN GIIGIDVNAY PFHLALSFTS KDGNLEKYQS INLNELLEAN SEKRQYLEWL IAHKIIKIAK KENKAIAIEN LNKLPKGKRG DGFAKLRSKL QKWSYKRLLD KIEILAKRNG IEIRKVNPAY TSVIGKLKYS PQYNIDKDIA GAYVIARRGL GYKEKLPKNY KELLNDIDFL SYTIARIEDS ITKLKQKIKE EKNEYKRSKI KSKLAKLRKN LKTLQNHVSR FTSPVSRSES GKSKTATQHP VNQRKEQVRG LPTGRHKSWQ VLSIALAFCC FERSYRDLSP LNRVIVSKDW TVVANRLAPV LGAGTMTLPK YRLLGSEVSE MAEYKYPNPS CSFIQFG
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