Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1148 |
Symbol | |
ID | 6331811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1196280 |
End bp | 1197146 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642657430 |
Product | hydroxymethylbutenyl pyrophosphate reductase |
Protein accession | YP_001931314 |
Protein GI | 188997063 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 95 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAATA TAATAGTTGC ACAAACAGCA GGATTTTGTT TTGGTGTAAG AATAGCTGTA GATATGGCAA AGCAAGCCGG AGAAAAACTC GGACATGCAT ATACAAATGG TCCAATAATC CATAACAAGC AAGTTGTTAA TTATCTCAAA TCTATTGGTG TTGAAGAGAT GCAGGACTAT TCACAACTAA AACCCGGCGA TACTGTAATT ATAAGGTCAC ATGGTGTACC ACCCAAAACA GAAAGAATGT TAAAAGAGTT GAATATAAAC GTTCTTGATG CTACATGTCC GTTTGTAAAA AAAGTTCATG ATAAAGTCAA GCAACTTGTT GAAGAAGGGT ACTTTGTAGT AATAATAGGT GAAGAAGGGC ATCCGGAAGT GATAGGAACG CTTGGACACC TTGAAGAAGT TGGCGGAAAA GGCGTTGTTG TTGAAAATTT TGAAGATTTA GTCAAAAAAG TTCCAAAAAG AAATAGAATC GGAGTAGTAG CACAAACAAC CCAAAGTGAA GACTTCTTCA GAGAAGCGGT AGGATATTTG GCAGAAAATA CAGAAGAGTT AAAAGTTTTT AATACAATTT GCGATGCTAC TTCTGTAAGA CAAGAAGAGG TTAAAAAAAT AGCACCAGAA GTTGATGTGA TGATAATCAT CGGTGGAAAA CACAGCGGAA ACACACAAAG ACTTTATCAG ATTTCAAAAG CATTAAATCC AAATACTTAT CATATAGAAA CAGCAGACGA GCTACAAAAT CAGTGGTTTG AAAATAAAGA AAATATAGGT ATATCAGCCG GTGCATCCAC ACCTGACTGG ATAATTCAAG AAGTTGTAAA TAAAATCAAA GAAATAAAAG GAGTTAGCCA TGAATGA
|
Protein sequence | MANIIVAQTA GFCFGVRIAV DMAKQAGEKL GHAYTNGPII HNKQVVNYLK SIGVEEMQDY SQLKPGDTVI IRSHGVPPKT ERMLKELNIN VLDATCPFVK KVHDKVKQLV EEGYFVVIIG EEGHPEVIGT LGHLEEVGGK GVVVENFEDL VKKVPKRNRI GVVAQTTQSE DFFREAVGYL AENTEELKVF NTICDATSVR QEEVKKIAPE VDVMIIIGGK HSGNTQRLYQ ISKALNPNTY HIETADELQN QWFENKENIG ISAGASTPDW IIQEVVNKIK EIKGVSHE
|
| |